RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 MAP4K1Q92918 833 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 PRR11Q96HE9 360 aaPredicted RBP4.16□□□□□ -1.74
COPA-204ENST00000481522 RMDN3Q96TC7 470 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 KATNAL1Q9BW62 490 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 VPS16Q9H269 839 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 TP63Q9H3D4 680 aaPredicted RBP4.16□□□□□ -1.74
COPA-204ENST00000481522 TRNAU1APQ9NX07 287 aaKnown RBP4.16□□□□□ -1.74
COPA-204ENST00000481522 DACT1Q9NYF0 836 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 LRFN1Q9P244 771 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 MAP1BP46821 2468 aaKnown RBP4.16□□□□□ -1.74
COPA-204ENST00000481522 WDFY4Q6ZS81 3184 aa4.16□□□□□ -1.74
COPA-204ENST00000481522 TNRC6CQ9HCJ0 1690 aaKnown RBP4.16□□□□□ -1.74
COPA-204ENST00000481522 UGGT1Q9NYU2 1555 aa4.15□□□□□ -1.74
COPA-204ENST00000481522 CCDC187A0A096LP49 1063 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 GXYLT2A0PJZ3 443 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 FCHO1O14526 889 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 INPPL1O15357 1258 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 DNPH1O43598 174 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 USP12O75317 370 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 TNFRSF6BO95407 300 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 CSTBP04080 98 aaKnown RBP4.15□□□□□ -1.75
COPA-204ENST00000481522 ALADP13716 330 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 ATF7P17544 494 aaPredicted RBP4.15□□□□□ -1.75
COPA-204ENST00000481522 SFPQP23246 707 aaKnown RBP eCLIP4.15□□□□□ -1.75
COPA-204ENST00000481522 CCKBRP32239 447 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 POLE2P56282 527 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 GALNT1Q10472 559 aaPredicted RBP4.15□□□□□ -1.75
COPA-204ENST00000481522 GRM4Q14833 912 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 SEC23BQ15437 767 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 PDCD2Q16342 344 aaPredicted RBP4.15□□□□□ -1.75
COPA-204ENST00000481522 C11orf87Q6NUJ2 197 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 ACSM6Q6P461 480 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 PIGOQ8TEQ8 1089 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 RSC1A1Q92681 617 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 EID2BQ96D98 161 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 KAZALD1Q96I82 304 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 FAR2Q96K12 515 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 PAAF1Q9BRP4 392 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 ABHD10Q9NUJ1 306 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 NCOR1O75376 2440 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 SPATA31A1Q5TZJ5 1347 aa4.15□□□□□ -1.75
COPA-204ENST00000481522 HTTP42858 3142 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 hCG_1642624A0A1W2PR95 340 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 ACKR2O00590 384 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 TP73O15350 636 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 CER1O95813 267 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 TOP3BO95985 862 aaKnown RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 MBPP02686 304 aaPredicted RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 KLRK1P26718 216 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 SLC8A1P32418 973 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 SERPINF1P36955 418 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 TRAPPC10P48553 1259 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 VPS41P49754 854 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 RPS13P62277 151 aaKnown RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 YPEL5P62699 121 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 ID2Q02363 134 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 MAP2K1Q02750 393 aaPredicted RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 ZNF91Q05481 1191 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 FHL1Q13642 323 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 FAM110CQ1W6H9 321 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 SLC9C1Q4G0N8 1177 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 FAM83BQ5T0W9 1011 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 ATPAF1Q5TC12 328 aaPredicted RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 SHC4Q6S5L8 630 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 TRABD2AQ86V40 505 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 NANOGP1Q8N7R0 232 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 SLC22A17Q8WUG5 538 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 GLMPQ8WWB7 406 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 AKAP1Q92667 903 aaKnown RBP eCLIP4.14□□□□□ -1.75
COPA-204ENST00000481522 ARPC5LQ9BPX5 153 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 RTKNQ9BST9 563 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 CDCP1Q9H5V8 836 aa4.14□□□□□ -1.75
COPA-204ENST00000481522 HERC5Q9UII4 1024 aaKnown RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 HEMK1Q9Y5R4 338 aaPredicted RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 SIRT4Q9Y6E7 314 aaPredicted RBP4.14□□□□□ -1.75
COPA-204ENST00000481522 THSD7BQ9C0I4 1608 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 LAMB2P55268 1798 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 ADAM10O14672 748 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 PPEF2O14830 753 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 RPP40O75818 363 aaKnown RBP4.13□□□□□ -1.75
COPA-204ENST00000481522 FGBP02675 491 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 CD63P08962 238 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 NDUFS1P28331 727 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 HSF1Q00613 529 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 GRAMD1BQ3KR37 738 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 CCDC174Q6PII3 467 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 KLHL17Q6TDP4 642 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 UEVLDQ8IX04 471 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 CACNA2D3Q8IZS8 1091 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 NPIPB3Q92617 1050 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 PIGKQ92643 395 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 FCRL5Q96RD9 977 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 SENP7Q9BQF6 1050 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 KCNK9Q9NPC2 374 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 ASNSD1Q9NWL6 643 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 ELOVL5Q9NYP7 299 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 SEMA5BQ9P283 1151 aa4.13□□□□□ -1.75
COPA-204ENST00000481522 PCDHB7Q9Y5E2 793 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms