RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 IGSF8Q969P0 613 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 ELSPBP1Q96BH3 223 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 CCDC114Q96M63 670 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 ZNF599Q96NL3 588 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 MAGEB5Q9BZ81 275 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 KLC2Q9H0B6 622 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 FAM114A2Q9NRY5 505 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 PAK5Q9P286 719 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 EPS15L1Q9UBC2 864 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 TRHDEQ9UKU6 1024 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
USP39-215ENST00000481409 R3HDM2Q9Y2K5 976 aaKnown RBP10.43□□□□□ -0.74
USP39-215ENST00000481409 DOCK6Q96HP0 2047 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 GOLGA6L7A0A1B0GV03 622 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 C5orf60A6NFR6 353 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 SGK1O00141 431 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 RAD51CO43502 376 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 OPHN1O60890 802 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 LUC7L3O95232 432 aaKnown RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 PRAMEF12O95522 483 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 NFATC1O95644 943 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ADH1CP00326 375 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 PENKP01210 267 aaPredicted RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 LAMP2P13473 410 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 PTGIRP43119 386 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 GEMIN4P57678 1058 aaKnown RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 GBE1Q04446 702 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 TNK2Q07912 1038 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 FCHO2Q0JRZ9 810 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 SLC10A2Q12908 348 aaPredicted RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 NR1H3Q13133 447 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 SMAD4Q13485 552 aaKnown RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 CUL1Q13616 776 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 DMC1Q14565 340 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 RFTN1Q14699 578 aaPredicted RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 LLGL1Q15334 1064 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 PPP1R7Q15435 360 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ALFQ53S48 1182 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 FAM78AQ5JUQ0 283 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ZC3H18Q86VM9 953 aaKnown RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 JAMLQ86YT9 394 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 MFSD6LQ8IWD5 586 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ARHGAP12Q8IWW6 846 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 BBS7Q8IWZ6 715 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 CCDC13Q8IYE1 715 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ADGRG2Q8IZP9 1017 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ATPAF2Q8N5M1 289 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 NPWQ8N729 165 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 FIBINQ8TAL6 211 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 DDI1Q8WTU0 396 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 NSMCE1Q8WV22 266 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 HTR3CQ8WXA8 447 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 CASKIN2Q8WXE0 1202 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ATG4AQ8WYN0 398 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ATP2A3Q93084 1043 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 LRRC45Q96CN5 670 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ZSWIM3Q96MP5 696 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 PRICKLE1Q96MT3 831 aaPredicted RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 ERP44Q9BS26 406 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 LRRC1Q9BTT6 524 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 TSPYL1Q9H0U9 437 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 SPHK2Q9NRA0 654 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 ETNK2Q9NVF9 386 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 MPP6Q9NZW5 540 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 KIAA1522Q9P206 1035 aaPredicted RBP10.42□□□□□ -0.74
USP39-215ENST00000481409 HPCAL4Q9UM19 191 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 NEU2Q9Y3R4 380 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 SNX10Q9Y5X0 201 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 CHD5Q8TDI0 1954 aa10.42□□□□□ -0.74
USP39-215ENST00000481409 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 PRRC2BQ5JSZ5 2229 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 KIF26AQ9ULI4 1882 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 H0Y626 953 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 NRG2O14511 850 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 MATN3O15232 486 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 HOXC11O43248 304 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 TBL1XO60907 577 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 GCATO75600 419 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 CNTN5O94779 1100 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 HEXIM1O94992 359 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 KRT14P02533 472 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 RHOCP08134 193 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 ITIH2P19823 946 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 IFNAR2P48551 515 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 RENBPP51606 427 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 PLK1P53350 603 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 GNA12Q03113 381 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 GAD2Q05329 585 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 IL10RBQ08334 325 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 SERINC3Q13530 473 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 SNX1Q13596 522 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 CDH18Q13634 790 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 HNRNPDQ14103 355 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 E2F5Q15329 346 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 RFWD3Q6PCD5 774 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms