RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 GABPB2Q8TAK5 448 aaPredicted RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 SMARCE1Q969G3 411 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 NACC2Q96BF6 587 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 R3HDM4Q96D70 268 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 MNTQ99583 582 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 ELOVL1Q9BW60 279 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 APOL6Q9BWW8 343 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 NPLQ9BXD5 320 aaPredicted RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 TEX12Q9BXU0 123 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TEX101Q9BY14 249 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SH2D4AQ9H788 454 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 ERVMER34-1Q9H9K5 563 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SLC35C2Q9NQQ7 365 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TAB2Q9NYJ8 693 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 IL1RAPL1Q9NZN1 696 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SEL1LQ9UBV2 794 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 EIF2B4Q9UI10 523 aaKnown RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 CNOT6Q9ULM6 557 aaKnown RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 NCANO14594 1321 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SMTNL1A8MU46 457 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 GRXCR1A8MXD5 290 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 SLC16A3O15427 465 aaKnown RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 AFPP02771 609 aaKnown RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 CHRM4P08173 479 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 QDPRP09417 244 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 TMIGD3P0DMS9 266 aaPredicted RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 CYP4B1P13584 511 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 IGFBP2P18065 325 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 HOXA5P20719 270 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 SAT1P21673 171 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 PRPH2P23942 346 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 EEF1DP29692 281 aaKnown RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 HOXC13P31276 330 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 HSD17B4P51659 736 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 RAD23AP54725 363 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 GPR162Q16538 588 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 SP5Q6BEB4 398 aaPredicted RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 TMEM88Q6PEY1 159 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 DPY19L3Q6ZPD9 716 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 HTR3DQ70Z44 454 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 MAVSQ7Z434 540 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 TMPRSS6Q8IU80 811 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 CEP97Q8IW35 865 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.66□□□□□ -1.5
COPA-203ENST00000481040 OR8H3Q8N146 312 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 ANKRD35Q8N283 1001 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 ENDOVQ8N8Q3 282 aaKnown RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 POC5Q8NA72 575 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 CADM4Q8NFZ8 388 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 MAFAQ8NHW3 353 aaPredicted RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 SLC22A18Q96BI1 424 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 FAM149B1Q96BN6 582 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 WDFY2Q96P53 400 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 HDHD5Q9BXW7 423 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 MRPL9Q9BYD2 267 aaKnown RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 SCPEP1Q9HB40 452 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 DECR2Q9NUI1 292 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 CWC25Q9NXE8 425 aaPredicted RBP5.66□□□□□ -1.5
COPA-203ENST00000481040 PEMTQ9UBM1 199 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 VPS4AQ9UN37 437 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 FRMD4BQ9Y2L6 1034 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 CHST2Q9Y4C5 530 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 CAPN7Q9Y6W3 813 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
COPA-203ENST00000481040 C17orf113A0A1B0GUU1 675 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 GOLGA6L6A8MZA4 724 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 KAT7O95251 611 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 FESP07332 822 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 PPP3CBP16298 524 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 MATN1P21941 496 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 BUD31P41223 144 aaPredicted RBP5.65□□□□□ -1.5
COPA-203ENST00000481040 MSH2P43246 934 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 HNRNPMP52272 730 aaKnown RBP eCLIP5.65□□□□□ -1.5
COPA-203ENST00000481040 PPP2R5CQ13362 524 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 TNFAIP1Q13829 316 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 ASIC2Q16515 512 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 NTRK2Q16620 822 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 AP5B1Q2VPB7 878 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 GXYLT1Q4G148 440 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 TCP11X2Q5H9J9 407 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 GJB7Q6PEY0 223 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 CRELD2Q6UXH1 353 aaPredicted RBP5.65□□□□□ -1.5
COPA-203ENST00000481040 SLC46A3Q7Z3Q1 461 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 GDF7Q7Z4P5 450 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 LINC00346Q8IVM7 164 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 ARHGAP12Q8IWW6 846 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 POMGNT2Q8NAT1 580 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 TP53I13Q8NBR0 393 aaPredicted RBP5.65□□□□□ -1.5
COPA-203ENST00000481040 XAGE5Q8WWM1 108 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 RNF31Q96EP0 1072 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 BOD1Q96IK1 185 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 GNRHR2Q96P88 292 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 MAP7D2Q96T17 732 aa5.65□□□□□ -1.5
COPA-203ENST00000481040 GPATCH1Q9BRR8 931 aaKnown RBP5.65□□□□□ -1.5
COPA-203ENST00000481040 CINPQ9BW66 212 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms