RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 ATF6P18850 670 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 KRT15P19012 456 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 PSMB4P28070 264 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 PPM1AP35813 382 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 ATP5C1P36542 298 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 NPY2RP49146 381 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 BTG3Q14201 252 aaPredicted RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 FRG1Q14331 258 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TMED2Q15363 201 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 ANO4Q32M45 955 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 C5orf22Q49AR2 442 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 MS4A13Q5J8X5 152 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 PIK3R6Q5UE93 754 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 STEAP4Q687X5 459 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 KCTD11Q693B1 232 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TTC19Q6DKK2 380 aaPredicted RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 LINC00523Q86TU6 105 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 LRRC6Q86X45 466 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TP53INP2Q8IXH6 220 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 AGGF1Q8N302 714 aaeCLIP10.09□□□□□ -0.793e-6■■■□□ 14.6
RAD51B-208ENST00000479335 ATPAF2Q8N5M1 289 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 DNAJC5GQ8N7S2 189 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 GSDMBQ8TAX9 411 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 MDM1Q8TC05 714 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 DCAKDQ8WVC6 231 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 ATXN2LQ8WWM7 1075 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TRMT2BQ96GJ1 504 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 PAFAH2Q99487 392 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TMEM106CQ9BVX2 250 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 SLC39A8Q9C0K1 460 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 TRABDQ9H4I3 376 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 PPANQ9NQ55 473 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 DNMT3LQ9UJW3 386 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
RAD51B-208ENST00000479335 AAR2Q9Y312 384 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 MYO18AQ92614 2054 aaKnown RBP10.09□□□□□ -0.79
RAD51B-208ENST00000479335 SLC12A8A0AV02 714 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 TRIM43BA6NCK2 446 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 FAM47DPA6NHR8 397 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 NDUFAB1O14561 156 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 ADAM12O43184 909 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 TLR5O60602 858 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 MAFKO60675 156 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 SOAT2O75908 522 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 MOCS2O96007 188 aaPredicted RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 JCHAINP01591 159 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 C1QAP02745 245 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 URODP06132 367 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 INHBAP08476 426 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 HSPA8P11142 646 aaKnown RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 CCNB1P14635 433 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 CSF2RAP15509 400 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 ALDH1A3P47895 512 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 YBEYP58557 167 aaPredicted RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 NAB1Q13506 487 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 KBTBD12Q3ZCT8 623 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 ARMC3Q5W041 872 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 UNC5AQ6ZN44 842 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 CAPN12Q6ZSI9 719 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 SLC26A11Q86WA9 606 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 SPATS2Q86XZ4 545 aaKnown RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 SRRM1Q8IYB3 904 aaKnown RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 TCEAL8Q8IYN2 117 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 STKLD1Q8NE28 680 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 GIPC2Q8TF65 315 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 TRIM43Q96BQ3 446 aaPredicted RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 STAMBPL1Q96FJ0 436 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 FCRL5Q96RD9 977 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 SMC6Q96SB8 1091 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 PRMT1Q99873 361 aaKnown RBP10.08□□□□□ -0.8
RAD51B-208ENST00000479335 LRRC40Q9H9A6 602 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 KCNK9Q9NPC2 374 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 IL23AQ9NPF7 189 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 NKIRAS1Q9NYS0 192 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 MOCS1Q9NZB8 636 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 RSPH14Q9UHP6 348 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 GGA2Q9UJY4 613 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 TTLL3Q9Y4R7 772 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 NR2E3Q9Y5X4 410 aa10.08□□□□□ -0.8
RAD51B-208ENST00000479335 DOCK4Q8N1I0 1966 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 ZNF840PA6NDX5 716 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 ARHGAP42A6NI28 874 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 FAM159BA6NKW6 160 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 ANXA9O76027 345 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 TBX18O95935 607 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 HMGA1P17096 107 aaKnown RBP10.07□□□□□ -0.8
RAD51B-208ENST00000479335 PGAM1P18669 254 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 ITGB8P26012 769 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 CNTFP26441 200 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 GBP2P32456 591 aaPredicted RBP10.07□□□□□ -0.8
RAD51B-208ENST00000479335 CD68P34810 354 aaPredicted RBP10.07□□□□□ -0.8
RAD51B-208ENST00000479335 MAPKAPK2P49137 400 aa10.07□□□□□ -0.8
RAD51B-208ENST00000479335 SERPINB9P50453 376 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms