RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 LMNTD2Q8IXW0 634 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 DCLK2Q8N568 766 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 DNAAF3Q8N9W5 541 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 PYDC1Q8WXC3 89 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SORT1Q99523 831 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 MLPHQ9BV36 600 aaPredicted RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 FAM124BQ9H5Z6 455 aaPredicted RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 DDIT4Q9NX09 232 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 CPSF2Q9P2I0 782 aaKnown RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 PPM1HQ9ULR3 514 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 CORO1CQ9ULV4 474 aaPredicted RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 ARHGAP42A6NI28 874 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 OPHN1O60890 802 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 IL1BP01584 269 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 GSTA2P09210 222 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ZNF865P0CJ78 1059 aaPredicted RBP11.06□□□□□ -0.64
VPS52-217ENST00000478934 WARSP23381 471 aaKnown RBP11.06□□□□□ -0.64
VPS52-217ENST00000478934 NUMBP49757 651 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 SERPINB9P50453 376 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 KLC1Q07866 573 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 PDK1Q15118 436 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 THEMIS2Q5TEJ8 643 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 C1orf146Q5VVC0 180 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ISLR2Q6UXK2 745 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 TIFABQ6ZNK6 161 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ARCQ7LC44 396 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 OTOP3Q7RTS5 596 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 BNIPLQ7Z465 357 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 STRA8Q7Z7C7 330 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 CERS2Q96G23 380 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 WWP1Q9H0M0 922 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
VPS52-217ENST00000478934 SNX15Q9NRS6 342 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 THAP1Q9NVV9 213 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 LAMA3Q16787 3333 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 HACD1B0YJ81 288 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 F8W810 466 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 SPECC1L-ADORA2AF8WAN1 911 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 PROCP04070 461 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 FAM200BP0CF97 657 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ZCCHC18P0CG32 403 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 SRGAP2BP0DMP2 458 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ACADSP16219 412 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 NFKB1P19838 968 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 PGFP49763 221 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ITGA7Q13683 1181 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 FAM219BQ5XKK7 198 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 SMYD5Q6GMV2 418 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 KDELC2Q7Z4H8 507 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 SH3TC2Q8TF17 1288 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 FAM136AQ96C01 138 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 ZNF419Q96HQ0 510 aaPredicted RBP11.06□□□□□ -0.64
VPS52-217ENST00000478934 PPP1R10Q96QC0 940 aaKnown RBP11.06□□□□□ -0.64
VPS52-217ENST00000478934 SLC2A13Q96QE2 648 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 MKS1Q9NXB0 559 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 TAGLN3Q9UI15 199 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 NUDT5Q9UKK9 219 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 G3BP2Q9UN86 482 aaKnown RBP11.06□□□□□ -0.64
VPS52-217ENST00000478934 PLA2G4CQ9UP65 541 aa11.06□□□□□ -0.64
VPS52-217ENST00000478934 GABRDO14764 452 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 HNRNPCL1O60812 293 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 STK10O94804 968 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 JCHAINP01591 159 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 LMNAP02545 664 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 POLBP06746 335 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 PNPLA4P41247 253 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 DAOAP59103 153 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TPI1P60174 286 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 PAFAH1B3Q15102 231 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 FSTL4Q6MZW2 842 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 C4orf22Q6V702 233 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TMPRSS6Q8IU80 811 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SPATA6LQ8N4H0 392 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SPATA22Q8NHS9 363 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 PIWIL2Q8TC59 973 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 CDKL2Q92772 493 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TMEM209Q96SK2 561 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SIK2Q9H0K1 926 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 ZCWPW2A0A1B0GU75 182 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 BIRC5O15392 142 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 LTFP02788 710 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 MLNP12872 115 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 NCF2P19878 526 aaPredicted RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 NMBRP28336 390 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SCNN1AP37088 669 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 IDH3AP50213 366 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SCNN1GP51170 649 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 IZUMO2Q6UXV1 221 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 KYAT3Q6YP21 454 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TRIM42Q8IWZ5 723 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TKTL2Q9H0I9 626 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SPON1Q9HCB6 807 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TXNDC16Q9P2K2 825 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 STX18Q9P2W9 335 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 COPG2Q9UBF2 871 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms