RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 SCN1AP35498 2009 aa6.31□□□□□ -1.4
CMSS1-203ENST00000478909 TRIP11Q15643 1979 aa6.31□□□□□ -1.4
CMSS1-203ENST00000478909 COL4A4P53420 1690 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CFAP73A6NFT4 308 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 DCDC2CA8MYV0 355 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 KBTBD13C9JR72 458 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 GABRDO14764 452 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 TNPO2O14787 897 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PAPSS1O43252 624 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 OPHN1O60890 802 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ATP5HO75947 161 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CALCAP01258 141 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 IFNB1P01574 187 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ATP5BP06576 529 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 FAM200BP0CF97 657 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ARL4AP40617 200 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 LILRA4P59901 499 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 YWHAZP63104 245 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ILF2Q12905 390 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PDIA2Q13087 525 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 FRG1Q14331 258 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 KCNJ11Q14654 390 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 COL19A1Q14993 1142 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 TRIP13Q15645 432 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 LONRF1Q17RB8 773 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CCDC14Q49A88 953 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ATP13A4Q4VNC1 1196 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 SLC45A4Q5BKX6 768 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ANKRD20A8PQ5CZ79 823 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 UBXN11Q5T124 520 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 GJC2Q5T442 439 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 RGMBQ6NW40 437 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PMF1Q6P1K2 205 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 LLGL2Q6P1M3 1020 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 DARS2Q6PI48 645 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CYP4V2Q6ZWL3 525 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 BNIPLQ7Z465 357 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 MRPL10Q7Z7H8 261 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PHLDB2Q86SQ0 1253 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ACOT1Q86TX2 421 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 SERINC5Q86VE9 423 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 TTC30AQ86WT1 665 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CDR2LQ86X02 465 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CCDC13Q8IYE1 715 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 VPS52Q8N1B4 723 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 SIX6OS1Q8N1H7 587 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PLD5Q8N7P1 536 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PCSK9Q8NBP7 692 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 B3GALNT2Q8NCR0 500 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 RAB3IL1Q8TBN0 382 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 GRIN3AQ8TCU5 1115 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 KBTBD7Q8WVZ9 684 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 HSPH1Q92598 858 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ISL2Q96A47 359 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ELMO3Q96BJ8 720 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PGBD4Q96DM1 585 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 ZMAT2Q96NC0 199 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 QKIQ96PU8 341 aaKnown RBP eCLIP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 SLC2A13Q96QE2 648 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 VAT1Q99536 393 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CEP44Q9C0F1 390 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 NXF3Q9H4D5 531 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 NRDE2Q9H7Z3 1164 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 VPS37BQ9H9H4 285 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PCDH18Q9HCL0 1135 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 MKS1Q9NXB0 559 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 DONSONQ9NYP3 566 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 FNIP2Q9P278 1114 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 TUBGCP4Q9UGJ1 667 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 DDX20Q9UHI6 824 aaKnown RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CDH9Q9ULB4 789 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 NAALADL1Q9UQQ1 740 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 USP15Q9Y4E8 981 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-203ENST00000478909 IPPQ9Y573 584 aa6.3□□□□□ -1.4
CMSS1-203ENST00000478909 CCT8L1PA6NM43 557 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 GIPC1O14908 333 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 SNX3O60493 162 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 KRT37O76014 449 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 GJB6O95452 261 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 OAS1P00973 400 aaKnown RBP6.29□□□□□ -1.4
CMSS1-203ENST00000478909 THP07101 528 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 MYL3P08590 195 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 RARBP10826 455 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 ODC1P11926 461 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 COL6A1P12109 1028 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 CYBAP13498 195 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 TCF4P15884 667 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 ALDH3A1P30838 453 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 SERPINB6P35237 376 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 RPL22P35268 128 aaKnown RBP6.29□□□□□ -1.4
CMSS1-203ENST00000478909 MSH2P43246 934 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 MAGEA3P43357 314 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 GLUD2P49448 558 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 VPS41P49754 854 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 SERPINB9P50453 376 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 SEC24CP53992 1094 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 HDAC4P56524 1084 aa6.29□□□□□ -1.4
CMSS1-203ENST00000478909 IFI35P80217 286 aaPredicted RBP6.29□□□□□ -1.4
CMSS1-203ENST00000478909 MRPS5P82675 430 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms