RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TAF12Q16514 161 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 AASDHQ4L235 1098 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMEM196Q5HYL7 178 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 C10orf25Q5T742 122 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 FAM90A2PQ658T7 463 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 PTCHD4Q6ZW05 846 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 LRRTM4Q86VH4 590 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 PAF1Q8N7H5 531 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 C11orf44Q8N8P7 122 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 HERVK_113Q902F9 699 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 MAP4K1Q92918 833 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 SEPSECSQ9HD40 501 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 KCNK9Q9NPC2 374 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMEM184CQ9NVA4 438 aa4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 CFAP65Q6ZU64 1925 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-212ENST00000478573 RRN3P2A6NIE6 340 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 H3BNX3 289 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 SPRY2O43597 315 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 LARGE1O95461 756 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 CER1O95813 267 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMEM225BP0DP42 221 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 CKMT1AP12532 417 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 AKT1P31749 480 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 PBX1P40424 430 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 ACTR2P61160 394 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 CUL4BQ13620 913 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 SMAD1Q15797 465 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 BTBD16Q32M84 506 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 INTS11Q5TA45 600 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 JAKMIP3Q5VZ66 844 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 DENND2CQ68D51 928 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 ANKS1BQ7Z6G8 1248 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 C2CD5Q86YS7 1000 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 MAFAQ8NHW3 353 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 CPT1BQ92523 772 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 RILPL2Q969X0 211 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 PPM1MQ96MI6 270 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 TRAPPC9Q96Q05 1148 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 TAF1DQ9H5J8 278 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 SNX15Q9NRS6 342 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 NDUFAF4Q9P032 175 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 SQORQ9Y6N5 450 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 UNC13BO14795 1591 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 CEP170BQ9Y4F5 1589 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 DUOX2Q9NRD8 1548 aa4.55□□□□□ -1.68
CDC42BPA-212ENST00000478573 MYO5BQ9ULV0 1848 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 LOC105369274A0A096LPK9 316 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 LOC102723532A0A0G2JNH3 316 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 PPP6R2O75170 966 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 AGR2O95994 175 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 TFRCP02786 760 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 PYGLP06737 847 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 APEHP13798 732 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 DDIT3P35638 169 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 GSTM5P46439 218 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 AARSP49588 968 aaKnown RBP eCLIP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 DIO1P49895 249 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 ID2Q02363 134 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 TLE2Q04725 743 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 TBX2Q13207 712 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 CC2D1BQ5T0F9 858 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 ANKRD45Q5TZF3 282 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 GRHL2Q6ISB3 625 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 CCDC144NLQ6NUI1 221 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 DCDC5Q6ZRR9 648 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 C16orf71Q8IYS4 520 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 OR4N4Q8N0Y3 316 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 VPS50Q96JG6 964 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 SIGLEC11Q96RL6 698 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 ELAC1Q9H777 363 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 RIC8AQ9NPQ8 531 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 POT1Q9NUX5 634 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 ZBTB1Q9Y2K1 713 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 UBE2J1Q9Y385 318 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 UBR1Q8IWV7 1749 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 ADGRL2O95490 1459 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 TET3O43151 1660 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 NPATQ14207 1427 aa4.54□□□□□ -1.68
CDC42BPA-212ENST00000478573 SPATA31D1Q6ZQQ2 1576 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 VWDEQ8N2E2 1590 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 LY6G6EA0A0G2JKS1 128 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 FAM90A10PA6NDY2 464 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 CD8B2A6NJW9 211 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 KIF28PB7ZC32 967 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMPRSS11DO60235 418 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 CREB1P16220 341 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 DRD1P21728 446 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 ADRA1DP25100 572 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 SERPINA4P29622 427 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 CCKARP32238 428 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 MCM5P33992 734 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 SF3A3Q12874 501 aaKnown RBP eCLIP4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 KCNB1Q14721 858 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 LARS2Q15031 903 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 TBRG1Q3YBR2 411 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 DGAT2L7PQ6IED9 249 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 KIAA1161Q6NSJ0 714 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 ANKRD13BQ86YJ7 626 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMTC1Q8IUR5 882 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms