RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ATRXP46100 2492 aa12.04□□□□□ -0.48
PDCD11-204ENST00000478543 LOC400499M0QZD8 3231 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 HEPACAM2A8MVW5 462 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 PDE2AO00408 941 aaPredicted RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 APOL1O14791 398 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 CST8O60676 142 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 CNTN5O94779 1100 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 LAMP2P13473 410 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 TCF3P15923 654 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ERCC2P18074 760 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 PAFAH1B1P43034 410 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 SGSHP51688 502 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ZNF135P52742 658 aaPredicted RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 STARD6P59095 220 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 NRG1Q02297 640 aaPredicted RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 HTR4Q13639 388 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 DPYSQ14117 519 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 RABGAP1LQ5R372 815 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ARTNQ5T4W7 220 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 TANGO2Q6ICL3 276 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 C1orf228Q6PIY5 440 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ZNF683Q8IZ20 524 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 PQLC3Q8N755 202 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 NETO2Q8NC67 525 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ZBTB44Q8NCP5 570 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ACTRT1Q8TDG2 376 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 BPIFB1Q8TDL5 484 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 NELL1Q92832 810 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 BHMTQ93088 406 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 PRICKLE1Q96MT3 831 aaPredicted RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 FAM118BQ9BPY3 351 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 AP1M1Q9BXS5 423 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 RCOR3Q9P2K3 495 aaPredicted RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 STOML2Q9UJZ1 356 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 CDV3Q9UKY7 258 aaKnown RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 SMG5Q9UPR3 1016 aaKnown RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 NEU3Q9UQ49 428 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ZFP37Q9Y6Q3 630 aaPredicted RBP12.03□□□□□ -0.48
PDCD11-204ENST00000478543 NUMBLQ9Y6R0 609 aa12.03□□□□□ -0.48
PDCD11-204ENST00000478543 ZNF487B1APH4 448 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 ANHXE9PGG2 379 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 LILRB5O75023 590 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 HOXC13P31276 330 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 HTR7P34969 479 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 IFNAR2P48551 515 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 HCAR3P49019 387 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 RPS24P62847 133 aaKnown RBP12.02□□□□□ -0.49
PDCD11-204ENST00000478543 TFDP2Q14188 446 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 GRM2Q14416 872 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 WHAMMP3Q1A5X7 153 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 ZNF528Q3MIS6 628 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 ALFQ53S48 1182 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 ACBD5Q5T8D3 534 aaPredicted RBP12.02□□□□□ -0.49
PDCD11-204ENST00000478543 NCBP2-AS2Q69YL0 99 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 PARM1Q6UWI2 310 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 VITQ6UXI7 678 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 TPGS1Q6ZTW0 290 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 BBS12Q6ZW61 710 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 TFAP2DQ7Z6R9 452 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 VSIG1Q86XK7 387 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 FAM217AQ8IXS0 508 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 CCDC33Q8N5R6 958 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 FGF14Q92915 247 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 PLA2G2FQ9BZM2 168 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 EPC1Q9H2F5 836 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 LINC00597Q9H2U6 94 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 TRPV4Q9HBA0 871 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 ZFP14Q9HCL3 533 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 SLC2A4RGQ9NR83 387 aa12.02□□□□□ -0.49
PDCD11-204ENST00000478543 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.49
PDCD11-204ENST00000478543 PPARGC1AQ9UBK2 798 aaKnown RBP12.02□□□□□ -0.49
PDCD11-204ENST00000478543 TTC7AQ9ULT0 858 aaPredicted RBP12.02□□□□□ -0.49
PDCD11-204ENST00000478543 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.02□□□□□ -0.49
PDCD11-204ENST00000478543 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 LAMA5O15230 3695 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 IGLV3-10A0A075B6K4 115 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 TYW5A2RUC4 315 aaKnown RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 DRGXA6NNA5 263 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 KRIT1O00522 736 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 SLC9A3R1O14745 358 aaPredicted RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 DCLK1O15075 740 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 FGF10O15520 208 aaPredicted RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 MFSD11O43934 449 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 TBL1XO60907 577 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 TJP3O95049 919 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 MAP3K6O95382 1288 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 PECAM1P16284 738 aaPredicted RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 RHOQP17081 205 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 CD72P21854 359 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 CHKAP35790 457 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 CSTF1Q05048 431 aaKnown RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 KLF1Q13351 362 aaPredicted RBP12.01□□□□□ -0.49
PDCD11-204ENST00000478543 TUBB2AQ13885 445 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 PPM1JQ5JR12 505 aa12.01□□□□□ -0.49
PDCD11-204ENST00000478543 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms