RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FAM72CH0Y354 149 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 I6L893 689 aaPredicted RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 MATN3O15232 486 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ALDH1A2O94788 518 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ABLIM3O94929 683 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 LATS1O95835 1130 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 C1RP00736 705 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 IGLV3-27P01718 113 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 URODP06132 367 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 POLBP06746 335 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 PTPN3P26045 913 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SSTR1P30872 391 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ALDH1A3P47895 512 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 MAPKAPK2P49137 400 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RENBPP51606 427 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TNK2Q07912 1038 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TAF10Q12962 218 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RAB33AQ14088 237 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 HNRNPDQ14103 355 aaKnown RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 SPARCL1Q14515 664 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TMED2Q15363 201 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 PARP15Q460N3 678 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SPANXN3Q5MJ09 141 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RTP2Q5QGT7 225 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 FAM72AQ5TYM5 149 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 GKAP1Q5VSY0 366 aaPredicted RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 TTC39BQ5VTQ0 682 aaPredicted RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 FAM72DQ6L9T8 149 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RWDD4Q6NW29 188 aaKnown RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RGS9BPQ6ZS82 235 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RTL10Q7L3V2 364 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 NECAB2Q7Z6G3 386 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 CPLX4Q7Z7G2 160 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 DDX53Q86TM3 631 aaKnown RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 FAM72BQ86X60 149 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SLC39A11Q8N1S5 342 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ANKS4BQ8N8V4 417 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ZNF461Q8TAF7 563 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 GABPB2Q8TAK5 448 aaPredicted RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 NSMCE1Q8WV22 266 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 PLD4Q96BZ4 506 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SIGLEC10Q96LC7 697 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 FCRL5Q96RD9 977 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 CCT8L2Q96SF2 557 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 PAFAH2Q99487 392 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 IL12RB2Q99665 862 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SEPT5Q99719 369 aaPredicted RBP8.13□□□□□ -1.11
VMA21-203ENST00000477649 PPP1R12CQ9BZL4 782 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 IL22Q9GZX6 179 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TRABDQ9H4I3 376 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 CWH43Q9H720 699 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ANLNQ9NQW6 1124 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 TMEM248Q9NWD8 314 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 MKS1Q9NXB0 559 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 NSMCE4AQ9NXX6 385 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SPG21Q9NZD8 308 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 GMIPQ9P107 970 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 SAMD15Q9P1V8 674 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 RSPH14Q9UHP6 348 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 DNMT3LQ9UJW3 386 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 CHMP2BQ9UQN3 213 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ATP11BQ9Y2G3 1177 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 ASB3Q9Y575 518 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 PTPRDP23468 1912 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 NLRC5Q86WI3 1866 aa8.13□□□□□ -1.11
VMA21-203ENST00000477649 FAM159BA6NKW6 160 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 DRGXA6NNA5 263 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 NEBLO76041 1014 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 MT-ND3P03897 115 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SNRPAP09012 282 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 CCNB1P14635 433 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 PFKLP17858 780 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 GCAP28676 217 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 ELF1P32519 619 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 ATP5C1P36542 298 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 ETFBP38117 255 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 HADHAP40939 763 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SLC11A2P49281 568 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 GATMP50440 423 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 GEMP55040 296 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 ARPP19P56211 112 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 DUSP4Q13115 394 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 LAMB3Q13751 1172 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 BTG3Q14201 252 aaPredicted RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 SEPT7Q16181 437 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 DBN1Q16643 649 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SKIDA1Q1XH10 827 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 C5orf22Q49AR2 442 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 PABPC1LQ4VXU2 614 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 C10orf120Q5SQS8 335 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SPOUT1Q5T280 376 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 HECTD3Q5T447 861 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 KCTD11Q693B1 232 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 TIFABQ6ZNK6 161 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 YTHDF3Q7Z739 585 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 DEFB128Q7Z7B8 93 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 ITIH5Q86UX2 942 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms