RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
DFFB-209ENST00000477548 CBLBQ13191 982 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 SEZ6Q53EL9 994 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 SLC9A4Q6AI14 798 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 NANOGP8Q6NSW7 305 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 SETD3Q86TU7 594 aaPredicted RBP13.72□□□□□ -0.21
DFFB-209ENST00000477548 MCUQ8NE86 351 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 SLC29A1Q99808 456 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 HEPHQ9BQS7 1158 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 EFCAB1Q9HAE3 211 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 COL20A1Q9P218 1284 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 COL4A5P29400 1685 aa13.72□□□□□ -0.21
DFFB-209ENST00000477548 WDR27A2RRH5 827 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 PRKCGP05129 697 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 JAK3P52333 1124 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 BCAR1P56945 870 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 MTX3Q5HYI7 312 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 TBC1D15Q8TC07 691 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 ITPKCQ96DU7 683 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 MSTO1Q9BUK6 570 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 CXorf21Q9HAI6 301 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 MOCS1Q9NZB8 636 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 A0A1W2PPW3 197 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 GPR25O00155 361 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 VAPBO95292 243 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 CST3P01034 146 aaPredicted RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 C8BP07358 591 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 CRADDP78560 199 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 INSCQ1MX18 579 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 LSM12Q3MHD2 195 aaKnown RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 GPR107Q5VW38 600 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 NIPAL1Q6NVV3 410 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 ZBTB46Q86UZ6 589 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 SLC7A3Q8WY07 619 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 PPWD1Q96BP3 646 aaKnown RBP13.71□□□□□ -0.21
DFFB-209ENST00000477548 CNDP1Q96KN2 507 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 PEBP4Q96S96 227 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 CDH7Q9ULB5 785 aa13.71□□□□□ -0.21
DFFB-209ENST00000477548 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 METTL18O95568 372 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 ESRRBO95718 433 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CCNE2O96020 404 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CDH5P33151 784 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 EGFLAMQ63HQ2 1017 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 NAPRTQ6XQN6 538 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 ZNF534Q76KX8 674 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 MARK4Q96L34 752 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 RNF157Q96PX1 679 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CAMKK2Q96RR4 588 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 NPAS2Q99743 824 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 GLIS2Q9BZE0 524 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 SLC7A5P2Q9GIP4 190 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CCDC68Q9H2F9 335 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 TRPC7Q9HCX4 862 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 PSAT1Q9Y617 370 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 F5H423 210 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 J3QRK9 145 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 TRIM38O00635 465 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 HMGCRP04035 888 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 MAGEA3P43357 314 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 NUMBP49757 651 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 BNIP3Q12983 259 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 NR1D2Q14995 579 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 ZBTB49Q6ZSB9 765 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 SCAIQ8N9R8 606 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 FBXL8Q96CD0 374 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 ACO2Q99798 780 aaKnown RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 ANKRD60Q9BZ19 345 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 POLR3FQ9H1D9 316 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 RPF2Q9H7B2 306 aaKnown RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 ASNSD1Q9NWL6 643 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 GID8Q9NWU2 228 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CYTH4Q9UIA0 394 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 GPC6Q9Y625 555 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 H3BMQ9 156 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 PIK3R2O00459 728 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 APOL1O14791 398 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 SEC24DO94855 1032 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 MAGEA6P43360 314 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 MYL6P60660 151 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 RGS21Q2M5E4 152 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CCDC153Q494R4 210 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 FGD3Q5JSP0 725 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms