RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 HDAC4P56524 1084 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 KLF1Q13351 362 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-204ENST00000477421 CRYMQ14894 314 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 DLG2Q15700 870 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ANKS1BQ7Z6G8 1248 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 IGDCC3Q8IVU1 814 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SEC14L1Q92503 715 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 PIF1Q9H611 641 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF358Q9NW07 568 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
COL27A1-204ENST00000477421 ATP6AP2A0A1C7CYW4 349 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 CCL22O00626 93 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ANGPT2O15123 496 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 MDM4O15151 490 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 GSTA4O15217 222 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ATP6AP2O75787 350 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 EPHA3P29320 983 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 OR1E1P30953 314 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SLC25A11Q02978 314 aaKnown RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 TBL3Q12788 808 aaKnown RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SH3D19Q5HYK7 790 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 RARS2Q5T160 578 aaKnown RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 PACS1Q6VY07 963 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 RNF180Q86T96 592 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 TUBGCP3Q96CW5 907 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 EXOC2Q96KP1 924 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 LGALS13Q9UHV8 139 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 A0A1B0GUL6 1792 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SMCHD1A6NHR9 2005 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 CARNS1A5YM72 827 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 NCAM2O15394 837 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 AKAP10O43572 662 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ATG7O95352 703 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 IQCF3P0C7M6 154 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 CCNB1P14635 433 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 CNTFP26441 200 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 AXLP30530 894 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 FCGRTP55899 365 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ANGPTL8Q6UXH0 198 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SLC26A9Q7LBE3 791 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SNX32Q86XE0 403 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 KCTD4Q8WVF5 259 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 NCLNQ969V3 563 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 EMID1Q96A84 441 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 APOL5Q9BWW9 433 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 BAG5Q9UL15 447 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SUFUQ9UMX1 484 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 PSMD3O43242 534 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 PTDSS1P48651 473 aaKnown RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 HARS2P49590 506 aaKnown RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 PEX6Q13608 980 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 DEFB128Q7Z7B8 93 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SLC41A1Q8IVJ1 513 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 CALML6Q8TD86 181 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SLCO2A1Q92959 643 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 SDCCAG3Q96C92 435 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 COLEC11Q9BWP8 271 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 WDR55Q9H6Y2 383 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-204ENST00000477421 CCDC167Q9P0B6 97 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 TRPV2Q9Y5S1 764 aa11.25□□□□□ -0.61
COL27A1-204ENST00000477421 AP3B1O00203 1094 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 MT-CYBP00156 380 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 IVDP26440 423 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 TBX4P57082 545 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 PITX1P78337 314 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF252P-AS1Q0IIN9 211 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 AGKQ53H12 422 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 SPDYAQ5MJ70 313 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 NOL9Q5SY16 702 aaKnown RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 AGAP9Q5VTM2 703 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 DPY19L2P1Q6NXN4 242 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 PCED1BQ96HM7 432 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 EML4Q9HC35 981 aaKnown RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 NCKIPSDQ9NZQ3 722 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 PLLPQ9Y342 182 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 CLUHO75153 1309 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 EME2A4GXA9 379 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 A8MX80 341 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 PRPF4O43172 522 aaKnown RBP eCLIP11.24□□□□□ -0.612e-16■■□□□ 13
COL27A1-204ENST00000477421 CD151P48509 253 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 IMPG1Q17R60 797 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 FUT11Q495W5 492 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 NEPROQ6NW34 567 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 HFE2Q6ZVN8 426 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 FCRL2Q96LA5 508 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 CPNE1Q99829 537 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms