RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 EGFLAMQ63HQ2 1017 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 ZNF385CQ66K41 422 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-214ENST00000477152 FOXD4L3Q6VB84 417 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-214ENST00000477152 PIP4P1Q86T03 277 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 MIB1Q86YT6 1006 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 CPXM2Q8N436 756 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 WFIKKN2Q8TEU8 576 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 DDI1Q8WTU0 396 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 GOLGA1Q92805 767 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 NKD1Q969G9 470 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 SIPA1Q96FS4 1042 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 CDC6Q99741 560 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 DDX50Q9BQ39 737 aaKnown RBP7.59□□□□□ -1.2
BRCA1-214ENST00000477152 KCTD10Q9H3F6 313 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 LRRC4Q9HBW1 653 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 TMEM74BQ9NUR3 256 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 HOOK1Q9UJC3 728 aaKnown RBP7.59□□□□□ -1.2
BRCA1-214ENST00000477152 KIAA1257Q9ULG3 409 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 STON1Q9Y6Q2 735 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 ADAMTS9Q9P2N4 1935 aa7.59□□□□□ -1.2
BRCA1-214ENST00000477152 ATXN2Q99700 1313 aaKnown RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 A0A1W2PQF6 199 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 CYP26A1O43174 497 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 CILPO75339 1184 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 RHOBTB3O94955 611 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 LATS1O95835 1130 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 ZNF883P0CG24 379 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 NCAM1P13591 858 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 CD58P19256 250 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 ETFBP38117 255 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 MATKP42679 507 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 CETN1Q12798 172 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 INPP5AQ14642 412 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 POU4F3Q15319 338 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 TRIP6Q15654 476 aaKnown RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 EDRF1Q3B7T1 1238 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 GUF1Q8N442 669 aaKnown RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 C12orf29Q8N999 325 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 KIAA0895Q8NCT3 520 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 FBXL13Q8NEE6 735 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 ZMIZ2Q8NF64 920 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 TMEM176AQ96HP8 235 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 MRGPRX1Q96LB2 322 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 IPO9Q96P70 1041 aaKnown RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 SCAND2PQ9GZW5 306 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 SDCBP2Q9H190 292 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 TMEM30AQ9NV96 361 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 MARCH2Q9P0N8 246 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 THAP10Q9P2Z0 257 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 SUN2Q9UH99 717 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 FBXO10Q9UK96 956 aa7.58□□□□□ -1.2
BRCA1-214ENST00000477152 HBS1LQ9Y450 684 aaKnown RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 KMT2BQ9UMN6 2715 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-214ENST00000477152 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 KLRC4O43908 158 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 DFNA5O60443 496 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 STC2O76061 302 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 BEST1O76090 585 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TBX18O95935 607 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ATP5BP06576 529 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 CISD3P0C7P0 127 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 PFKFB1P16118 471 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 CASP1P29466 404 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 CORO1AP31146 461 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 GCLMP48507 274 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 YWHAGP61981 247 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 DLG4P78352 724 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ZBTB16Q05516 673 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 EFEMP1Q12805 493 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TTC31Q49AM3 519 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SERPINA13PQ6UXR4 307 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 NAXDQ8IW45 347 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SIX6OS1Q8N1H7 587 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 DEFB119Q8N690 84 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 CIPCQ9C0C6 399 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 MMRN2Q9H8L6 949 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ELOVL2Q9NXB9 296 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 CACNA2D2Q9NY47 1150 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 WSB2Q9NYS7 404 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SCML1Q9UN30 329 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 NCKAP1Q9Y2A7 1128 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SPAARA0A1B0GVQ0 90 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SLC12A8A0AV02 714 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 FAM221BA6H8Z2 402 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 PRRT4C9JH25 899 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 BCAT2O15382 392 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 FLRT2O43155 660 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 HYAL3O43820 417 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 RNASEH1O60930 286 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ZBED1O96006 694 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 PENKP01210 267 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 EPHX1P07099 455 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TBXAS1P24557 533 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 PPP1R2P41236 205 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 MXI1P50539 228 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 BCAT1P54687 386 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 MFAP3P55082 362 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms