RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-213ENST00000476777 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-213ENST00000476777 PRPF39Q86UA1 669 aaKnown RBP11.77□□□□□ -0.53
BRCA1-213ENST00000476777 UNC45BQ8IWX7 931 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 SCML4Q8N228 414 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 CARNMT1Q8N4J0 409 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 OR4C6Q8NH72 309 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 PTPRN2Q92932 1015 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 AZIN2Q96A70 460 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 MED8Q96G25 268 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 DPH1Q9BZG8 443 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 TMEM8AQ9HCN3 771 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 ASCL3Q9NQ33 180 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 CNGB3Q9NQW8 809 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 EXOC1Q9NV70 894 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 CYTH4Q9UIA0 394 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 TSPAN16Q9UKR8 245 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 TRAF3IP3Q9Y228 551 aa11.77□□□□□ -0.53
BRCA1-213ENST00000476777 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 A0A1B0GVM2 712 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 SLC28A2O43868 658 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 RTN2O75298 545 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 IL1BP01584 269 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 CKMT1AP12532 417 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 DGKAP23743 735 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 MAT2AP31153 395 aaKnown RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 NUDT1P36639 197 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 METAP1P53582 386 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 DAOAP59103 153 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 ENPEPQ07075 957 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 BST2Q10589 180 aaKnown RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 CDH18Q13634 790 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 KRT39Q6A163 491 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 SIX6OS1Q8N1H7 587 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 KCTD13Q8WZ19 329 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 RPL10LQ96L21 214 aaKnown RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-213ENST00000476777 DEPDC7Q96QD5 511 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 POLR1BQ9H9Y6 1135 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 UCKL1Q9NWZ5 548 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 DMTF1Q9Y222 760 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 CA5BQ9Y2D0 317 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 BSNQ9UPA5 3926 aa11.76□□□□□ -0.53
BRCA1-213ENST00000476777 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 NYNRINQ9P2P1 1898 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 SLC7A4O43246 635 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 PLRG1O43660 514 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 CSO75390 466 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 LUC7L3O95232 432 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 GIMD1P0DJR0 217 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 KRT10P13645 584 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 KRT13P13646 458 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 VAV1P15498 845 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 NR2F2P24468 414 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 GTF2H1P32780 548 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 TBX4P57082 545 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 STAT4Q14765 748 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 NFIL3Q16649 462 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 SGO2Q562F6 1265 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 MS4A13Q5J8X5 152 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 RESP18Q5W5W9 173 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 TRIM69Q86WT6 500 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 FAM186BQ8IYM0 893 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 APCDD1Q8J025 514 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 CFAP52Q8N1V2 620 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 TMEM145Q8NBT3 493 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 UBA3Q8TBC4 463 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 KLHDC7BQ96G42 594 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 PAGE5Q96GU1 130 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 FCRL2Q96LA5 508 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 DDX50Q9BQ39 737 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 NUCKS1Q9H1E3 243 aaKnown RBP11.75□□□□□ -0.53
BRCA1-213ENST00000476777 THSD1Q9NS62 852 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 KLHL11Q9NVR0 708 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 HESX1Q9UBX0 185 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
BRCA1-213ENST00000476777 MYO9AB2RTY4 2548 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 LY6G6EA0A0G2JKS1 128 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 A0A1W2PNU3 283 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 PRAMEF26H0Y7S4 382 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 K7ENP7 123 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 FFAR2O15552 330 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 MOCS3O95396 460 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 GP1BAP07359 652 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 MYF5P13349 255 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 LCP1P13796 627 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 PSMC2P35998 433 aaKnown RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 STK19P49842 368 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 SKOR1P84550 965 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 POM121L1PQ3SYA9 428 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 HS1BP3Q53T59 392 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms