RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GOT1P17174 413 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 TACR2P21452 398 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
HDAC6-219ENST00000476625 PRCPP42785 496 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 CCR5P51681 352 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 ZNF445P59923 1031 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-219ENST00000476625 CNTN1Q12860 1018 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 PNOCQ13519 176 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 E2F5Q15329 346 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 ZC3H12AQ5D1E8 599 aaKnown RBP12.37□□□□□ -0.43
HDAC6-219ENST00000476625 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 ANKRD40Q6AI12 368 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 NAPEPLDQ6IQ20 393 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 LCLAT1Q6UWP7 414 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDAC6-219ENST00000476625 TMC6Q7Z403 805 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 CHSY1Q86X52 802 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 SLC25A45Q8N413 288 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 SLC39A13Q96H72 371 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 CYTH4Q9UIA0 394 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 FZD4Q9ULV1 537 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 CLCA2Q9UQC9 943 aa12.37□□□□□ -0.43
HDAC6-219ENST00000476625 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 FAM170AA1A519 330 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
HDAC6-219ENST00000476625 LATO43561 262 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 BNIP3LO60238 219 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 DFNA5O60443 496 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 ASLP04424 464 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 CKMT2P17540 419 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 C5AR1P21730 350 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 TAS2R38P59533 333 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 LY6DQ14210 128 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 TAF5Q15542 800 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 EDRF1Q3B7T1 1238 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 TBC1D25Q3MII6 688 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 ZNF542PQ5EBM4 170 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 MPP7Q5T2T1 576 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 DENND1BQ6P3S1 775 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 RRAGAQ7L523 313 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 GPR155Q7Z3F1 870 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 ZNF605Q86T29 641 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 UNC45BQ8IWX7 931 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 SCML4Q8N228 414 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 FRS2Q8WU20 508 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 FAM149B1Q96BN6 582 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 SPATA32Q96LK8 384 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 DNAI2Q9GZS0 605 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 COQ4Q9Y3A0 265 aa12.36□□□□□ -0.43
HDAC6-219ENST00000476625 TARSL2A2RTX5 802 aaKnown RBP12.35□□□□□ -0.43
HDAC6-219ENST00000476625 CETN3O15182 167 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 IRAK2O43187 625 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 MT-CO3P00414 261 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 SRPRAP08240 638 aaKnown RBP12.35□□□□□ -0.43
HDAC6-219ENST00000476625 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 RXRGP48443 463 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 ARRB1P49407 418 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-219ENST00000476625 CLDN2P57739 230 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 CFHR1Q03591 330 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 ENPEPQ07075 957 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 ARHGAP40Q5TG30 622 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 AGBL4Q5VU57 503 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 RNF219Q5W0B1 726 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-219ENST00000476625 Q6ZVU0 165 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 TTC39CQ8N584 583 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 DCBLD1Q8N8Z6 715 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 IRGQQ8WZA9 623 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 FGF11Q92914 225 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 OSBPL2Q9H1P3 480 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 ST7Q9NRC1 585 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 ASXL3Q9C0F0 2248 aa12.35□□□□□ -0.43
HDAC6-219ENST00000476625 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 LY6G6EA0A0G2JKS1 128 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 FAM237AA0A1B0GTK4 181 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 A0A1B0GVM2 712 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 A0A1W2PNU3 283 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-219ENST00000476625 PLRG1O43660 514 aaKnown RBP12.34□□□□□ -0.43
HDAC6-219ENST00000476625 NEBLO76041 1014 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 ADH1BP00325 375 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 MYL1P05976 194 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 CTSLP07711 333 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 C1SP09871 688 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 ACP1P24666 158 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-219ENST00000476625 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 CXorf57Q6NSI4 855 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms