RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SLC8A1P32418 973 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 NNMTP40261 264 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 CSNK1EP49674 416 aaKnown RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 IRAK1P51617 712 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ZNF177Q13360 481 aaPredicted RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 HNRNPDQ14103 355 aaKnown RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 CST6Q15828 149 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 SLC25A52Q3SY17 297 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 BRMS1LQ5PSV4 323 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 IL27RAQ6UWB1 636 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ARCQ7LC44 396 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ZNF677Q86XU0 584 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 MMAAQ8IVH4 418 aaKnown RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 ZNF683Q8IZ20 524 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 OR52K2Q8NGK3 314 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 GANCQ8TET4 914 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 CPA5Q8WXQ8 436 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 BIRC7Q96CA5 298 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 C1orf74Q96LT6 269 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 GBP4Q96PP9 640 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ORAI3Q9BRQ5 295 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 FEM1AQ9BSK4 669 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 TKTL2Q9H0I9 626 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 SIK2Q9H0K1 926 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 NEUROG2Q9H2A3 272 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ADAMTS1Q9UHI8 967 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 TMEM59LQ9UK28 342 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 STAP1Q9ULZ2 295 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 TBC1D30Q9Y2I9 924 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 OR51B4Q9Y5P0 310 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 SLCO1B1Q9Y6L6 691 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 CACNA1BQ00975 2339 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 SPAARA0A1B0GVQ0 90 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 A0A1B0GVT2 93 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 A0A1W2PP55 124 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 C10orf142B7Z368 130 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 MID1O15344 667 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 ATP9BO43861 1147 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 SH3BP5O60239 455 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 CNTN5O94779 1100 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 FSBPO95073 299 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 IGHV4-34P06331 123 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 MMEP08473 750 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 CD27P26842 260 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 FLT3P36888 993 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 GGCXP38435 758 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 STK19P49842 368 aaPredicted RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 KLK7P49862 253 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 SULT1E1P49888 294 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 AFF3P51826 1226 aaKnown RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 GALCP54803 685 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 CDH4P55283 916 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 JAM2P57087 298 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 NOMO3P69849 1222 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 FAM193AP78312 1265 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 CENPCQ03188 943 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 FOXC1Q12948 553 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 HLA-BQ31612 363 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 FAM102AQ5T9C2 384 aaPredicted RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 SASS6Q6UVJ0 657 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 DBX2Q6ZNG2 339 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.633e-11■■■□□ 16.6
SEC13-214ENST00000476597 STK40Q8N2I9 435 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 FRS2Q8WU20 508 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 TBCBQ99426 244 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 GAREM1Q9H706 876 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 IL21RQ9HBE5 538 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 TM9SF3Q9HD45 589 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 ANO10Q9NW15 660 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 SERGEFQ9UGK8 458 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 LIMA1Q9UHB6 759 aaKnown RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 NOCTQ9UK39 431 aaKnown RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 FZD4Q9ULV1 537 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 DAAM1Q9Y4D1 1078 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 TNRC6BQ9UPQ9 1833 aaKnown RBP11.11□□□□□ -0.63
SEC13-214ENST00000476597 PI4KAP42356 2102 aa11.11□□□□□ -0.63
SEC13-214ENST00000476597 KNL1Q8NG31 2342 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 IGF2RP11717 2491 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 CKAP5Q14008 2032 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 EPHB6O15197 1021 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 RNASEH2AO75792 299 aaKnown RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 GFPT2O94808 682 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 ENDOD1O94919 500 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 TOP3BO95985 862 aaKnown RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 ADH1BP00325 375 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 CYP1A1P04798 512 aaPredicted RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 TPM2P07951 284 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 VAV1P15498 845 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 GOT1P17174 413 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 CHRNB2P17787 502 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 C5AR1P21730 350 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 GRIA4P48058 902 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 NUMBP49757 651 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms