RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), human

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-208	ENST00000476590	POLR2B	P30876	1174 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GALNS	P34059	522 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PGM1	P36871	562 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SERPINB5	P36952	375 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CAP2	P40123	477 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ATP5O	P48047	213 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	POU3F4	P49335	361 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CEBPA	P49715	358 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ARSD	P51689	593 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CLCN4	P51793	760 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZNF280A	P59817	542 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ESRRG	P62508	458 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MYBPC1	Q00872	1141 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SNAPC2	Q13487	334 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	LRRC14	Q15048	493 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PFKFB3	Q16875	520 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ARHGAP44	Q17R89	818 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SLC9C1	Q4G0N8	1177 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CEP55	Q53EZ4	464 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ESCO2	Q56NI9	601 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PDE12	Q6L8Q7	609 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MFSD5	Q6N075	450 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SWSAP1	Q6NVH7	229 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ARSK	Q6UWY0	536 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ABRAXAS1	Q6UWZ7	409 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	HAUS6	Q7Z4H7	955 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZBTB46	Q86UZ6	589 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	IGFN1	Q86VF2	1251 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GPBP1	Q86WP2	473 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	C2CD5	Q86YS7	1000 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SRBD1	Q8N5C6	995 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SLC15A4	Q8N697	577 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NAT8L	Q8N9F0	302 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	IL17RE	Q8NFR9	667 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	OR8H1	Q8NGG4	311 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	OR52K2	Q8NGK3	314 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZNF398	Q8TD17	642 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GRK7	Q8WTQ7	553 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	GDPD5	Q8WTR4	605 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	THAP3	Q8WTV1	239 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	FIG4	Q92562	907 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PIK3R3	Q92569	461 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SEPT8	Q92599	483 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TNFRSF25	Q93038	417 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	C12orf43	Q96C57	262 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	FBXL8	Q96CD0	374 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ISOC1	Q96CN7	298 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	PTCD3	Q96EY7	689 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MS4A14	Q96JA4	679 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	EXOC2	Q96KP1	924 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TMEM68	Q96MH6	324 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CMTM3	Q96MX0	182 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CITED4	Q96RK1	184 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MEIS3	Q99687	375 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	SEC22C	Q9BRL7	303 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TRIM56	Q9BRZ2	755 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	C1orf50	Q9BV19	199 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZMYND12	Q9H0C1	365 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	LMAN2L	Q9H0V9	348 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MCCC2	Q9HCC0	563 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	RAVER2	Q9HCJ3	691 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ANLN	Q9NQW6	1124 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TPSG1	Q9NRR2	321 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MCM9	Q9NXL9	1143 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	TAS2R1	Q9NYW7	299 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	HECA	Q9UBI9	543 aa	Predicted RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	DBNL	Q9UJU6	430 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	CAPN11	Q9UMQ6	739 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	MRPS7	Q9Y2R9	242 aa	Known RBP	4.24	□□□□□ -1.73
CD55-208	ENST00000476590	DERA	Q9Y315	318 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ZHX2	Q9Y6X8	837 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ANKRD26	Q9UPS8	1709 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	NRCAM	Q92823	1304 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	A2M	P01023	1474 aa		4.24	□□□□□ -1.73
CD55-208	ENST00000476590	ATP7A	Q04656	1500 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CD55-208	ENST00000476590	TMEM120B	A0PK00	339 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	PTPDC1	A2A3K4	754 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	GSG1L2	A8MUP6	293 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	MINDY4B	A8MYZ0	360 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	C6orf229	H3BNL8	230 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	CCDC188	H7C350	402 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	C2CD2L	O14523	706 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	MAGEB2	O15479	319 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	ZBTB43	O43298	467 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	SNAP91	O60641	907 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	GAS7	O60861	476 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	PPP6R2	O75170	966 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	CCNDBP1	O95273	360 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	STAU1	O95793	577 aa	Known RBP	4.23	□□□□□ -1.73
CD55-208	ENST00000476590	NR3C2	P08235	984 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	SLC2A3	P11169	496 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	TAC1	P20366	129 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	TGM1	P22735	817 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	CCNE1	P24864	410 aa		4.23	□□□□□ -1.73
CD55-208	ENST00000476590	CASP1	P29466	404 aa		4.23	□□□□□ -1.73

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