RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 DMTF1Q9Y222 760 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 TYW5A2RUC4 315 aaKnown RBP17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 KLK10O43240 276 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 OPA1O60313 960 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 USP12O75317 370 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 GABBR2O75899 941 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 LCP1P13796 627 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 DGKAP23743 735 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 PSMC2P35998 433 aaKnown RBP17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 NUDT1P36639 197 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 LSSP48449 732 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 ERVPABLB-1P60509 514 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 VAC14Q08AM6 782 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 ELAVL3Q14576 367 aaKnown RBP17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 STAT4Q14765 748 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 CCDC117Q8IWD4 279 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 APCDD1Q8J025 514 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 CFAP52Q8N1V2 620 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 FBXL13Q8NEE6 735 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 OR4C6Q8NH72 309 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 DEPDC7Q96QD5 511 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 KDM4CQ9H3R0 1056 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 UCKL1Q9NWZ5 548 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 CA5BQ9Y2D0 317 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 CEP83Q9Y592 693 aa17.01■□□□□ 0.31
APOBEC3F-203ENST00000476513 A0A1B0GVM2 712 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 LUC7L3O95232 432 aaKnown RBP17■□□□□ 0.31
APOBEC3F-203ENST00000476513 WISP1O95388 367 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 MOCS3O95396 460 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 CD19P15391 556 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 VAV1P15498 845 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 STK19P49842 368 aaPredicted RBP17■□□□□ 0.31
APOBEC3F-203ENST00000476513 MCCD1P59942 119 aaPredicted RBP17■□□□□ 0.31
APOBEC3F-203ENST00000476513 HS1BP3Q53T59 392 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 DCAF6Q58WW2 860 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 MS4A13Q5J8X5 152 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 RNF219Q5W0B1 726 aaPredicted RBP17■□□□□ 0.31
APOBEC3F-203ENST00000476513 TMC6Q7Z403 805 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 TRIM69Q86WT6 500 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 FCRL2Q96LA5 508 aaPredicted RBP17■□□□□ 0.31
APOBEC3F-203ENST00000476513 DPH1Q9BZG8 443 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 POLR1BQ9H9Y6 1135 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 ASCL3Q9NQ33 180 aa17■□□□□ 0.31
APOBEC3F-203ENST00000476513 ATMQ13315 3056 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 PRAMEF26H0Y7S4 382 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 O00370 1275 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 FFAR2O15552 330 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 SLC7A4O43246 635 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 PLRG1O43660 514 aaKnown RBP16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 SLC28A2O43868 658 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 CSO75390 466 aaKnown RBP16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 SETSIPP0DME0 302 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 CKMT1AP12532 417 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 ME1P48163 572 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 RGS7P49802 495 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 MXI1P50539 228 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 ADAM9Q13443 819 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 POM121L1PQ3SYA9 428 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 IRGQQ8WZA9 623 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 EEF2KMTQ96G04 330 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 MED8Q96G25 268 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 KLHDC7BQ96G42 594 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 VCPIP1Q96JH7 1222 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
APOBEC3F-203ENST00000476513 PIK3R2O00459 728 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 LTFP02788 710 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 GIMD1P0DJR0 217 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 MYF5P13349 255 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 KRT10P13645 584 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 RPL13P26373 211 aaKnown RBP16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 NUMBP49757 651 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 AGBL4Q5VU57 503 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 FRS2Q8WU20 508 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 SPAG5Q96R06 1193 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 THSD1Q9NS62 852 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 KLHL11Q9NVR0 708 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 SARDHQ9UL12 918 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 MAPK8IP1Q9UQF2 711 aa16.98■□□□□ 0.31
APOBEC3F-203ENST00000476513 VDRP11473 427 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 NNMTP40261 264 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 KCNMA1Q12791 1236 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 CUL2Q13617 745 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 SETMARQ53H47 684 aaPredicted RBP16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 PMF1Q6P1K2 205 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 LGI2Q8N0V4 545 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 TMEM145Q8NBT3 493 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 CLEC4CQ8WTT0 213 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 SLC35F5Q8WV83 523 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 SLC39A13Q96H72 371 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 OSBPL2Q9H1P3 480 aa16.97■□□□□ 0.31
APOBEC3F-203ENST00000476513 XPO7Q9UIA9 1087 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms