RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PEAR1Q5VY43 1037 aaPredicted RBP21.79■■□□□ 1.08
LIME1-204ENST00000476183 DGLUCYQ7Z3D6 616 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 KDM1BQ8NB78 822 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 ZNF419Q96HQ0 510 aaPredicted RBP21.79■■□□□ 1.08
LIME1-204ENST00000476183 RPL10LQ96L21 214 aaKnown RBP21.79■■□□□ 1.08
LIME1-204ENST00000476183 C1orf74Q96LT6 269 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 HSPA12BQ96MM6 686 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 TMEM51Q9NW97 253 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 TAS2R14Q9NYV8 317 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 OR51B4Q9Y5P0 310 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 DOCK4Q8N1I0 1966 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.78■■□□□ 1.08
LIME1-204ENST00000476183 LNP1A1A4G5 178 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 DRGXA6NNA5 263 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 NDUFS2O75306 463 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 CCDC172P0C7W6 258 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 ACADMP11310 421 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 KRT3P12035 628 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 SDC4P31431 198 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 RFC1P35251 1148 aaPredicted RBP21.78■■□□□ 1.08
LIME1-204ENST00000476183 PTPN9P43378 593 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 CDH4P55283 916 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 C1QBPQ07021 282 aaKnown RBP21.78■■□□□ 1.08
LIME1-204ENST00000476183 ZNF177Q13360 481 aaPredicted RBP21.78■■□□□ 1.08
LIME1-204ENST00000476183 ARID5BQ14865 1188 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 C9orf64Q5T6V5 341 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 C3orf20Q8ND61 904 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 HAPLN3Q96S86 360 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 FEM1AQ9BSK4 669 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 RTKNQ9BST9 563 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 FBRSQ9HAH7 460 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 MPP6Q9NZW5 540 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 TBC1D30Q9Y2I9 924 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 NCOR2Q9Y618 2525 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 ITIH6Q6UXX5 1313 aa21.78■■□□□ 1.08
LIME1-204ENST00000476183 IGLV3-10A0A075B6K4 115 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 DCDC2BA2VCK2 349 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 E9PAM4 449 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 KHNYNO15037 678 aaKnown RBP21.77■■□□□ 1.08
LIME1-204ENST00000476183 LIMK1P53667 647 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 IRX4P78413 519 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 ASIC2Q16515 512 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 STPG1Q5TH74 334 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 ACAD10Q6JQN1 1059 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 WDR59Q6PJI9 974 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 FAM124AQ86V42 546 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 CENPIQ92674 756 aaPredicted RBP21.77■■□□□ 1.08
LIME1-204ENST00000476183 SELENOOQ9BVL4 669 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 GPR174Q9BXC1 333 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 RSPH9Q9H1X1 276 aaPredicted RBP21.77■■□□□ 1.08
LIME1-204ENST00000476183 AIPL1Q9NZN9 384 aa21.77■■□□□ 1.08
LIME1-204ENST00000476183 SIGLEC16A6NMB1 481 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 TNFAIP3P21580 790 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 OXTRP30559 389 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 PBX1P40424 430 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 OXCT1P55809 520 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 HDAC4P56524 1084 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 TRIM61Q5EBN2 209 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 RNF219Q5W0B1 726 aaPredicted RBP21.76■■□□□ 1.07
LIME1-204ENST00000476183 ERMP1Q7Z2K6 904 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 MCOLN2Q8IZK6 566 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 EDEM2Q9BV94 578 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 HAUS4Q9H6D7 363 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 ZNF212Q9UDV6 495 aa21.76■■□□□ 1.07
LIME1-204ENST00000476183 EVLQ9UI08 416 aaPredicted RBP21.76■■□□□ 1.07
LIME1-204ENST00000476183 NYNRINQ9P2P1 1898 aaKnown RBP21.75■■□□□ 1.07
LIME1-204ENST00000476183 SRGAP2O75044 1071 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 VAV1P15498 845 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 GPD1P21695 349 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 RRM1P23921 792 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 ADRA1BP35368 520 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 TPM4P67936 248 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 SULT2A1Q06520 285 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 SKOR2Q2VWA4 1001 aaPredicted RBP21.75■■□□□ 1.07
LIME1-204ENST00000476183 PPP1R15BQ5SWA1 713 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 SFMBT2Q5VUG0 894 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 ZNF776Q68DI1 518 aaPredicted RBP21.75■■□□□ 1.07
LIME1-204ENST00000476183 DNAJC24Q6P3W2 148 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 LRRC31Q6UY01 552 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 STRADAQ7RTN6 431 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 ZNF571Q7Z3V5 609 aaPredicted RBP21.75■■□□□ 1.07
LIME1-204ENST00000476183 TFAP2DQ7Z6R9 452 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 DNAAF5Q86Y56 855 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 FAM172AQ8WUF8 416 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 PTPRN2Q92932 1015 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 PSMB7Q99436 277 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 NUP58Q9BVL2 599 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 MAGEB5Q9BZ81 275 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 CACNA1EQ15878 2313 aa21.75■■□□□ 1.07
LIME1-204ENST00000476183 EDDM13A0A1B0GTR0 161 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 TARSL2A2RTX5 802 aaKnown RBP21.74■■□□□ 1.07
LIME1-204ENST00000476183 TMCO5BA8MYB1 307 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 RHOCP08134 193 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 MAOBP27338 520 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 ACSL1P33121 698 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 HOXD12P35452 270 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 PRKCIP41743 596 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 DPP6P42658 865 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 UBASH3AP57075 661 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 RPL7AP62424 266 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms