RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 E5RJQ4 531 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TAF4O00268 1085 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TFPTP0C1Z6 253 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TFE3P19532 575 aaPredicted RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 GTF2E2P29084 291 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 AKR1D1P51857 326 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 HSF5Q4G112 596 aaPredicted RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CIAPIN1Q6FI81 312 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CDC73Q6P1J9 531 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF438Q7Z4V0 828 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TAF8Q7Z7C8 310 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 BTBD9Q96Q07 612 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CATSPERBQ9H7T0 1116 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 LIN28AQ9H9Z2 209 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 NEK6Q9HC98 313 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ZNHIT2Q9UHR6 403 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 POLR1DQ9Y2S0 133 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 FADS3Q9Y5Q0 445 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CAPN8A6NHC0 703 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CBFA2T3O75081 653 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TGDSO95455 350 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CNPP09543 421 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SULT1E1P49888 294 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 RPL26P61254 145 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 GK3PQ14409 553 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TGFBIQ15582 683 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CHI3L2Q15782 390 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 KCTD21Q4G0X4 260 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PACS1Q6VY07 963 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CROCCP3Q8IVE0 287 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 IPMKQ8NFU5 416 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 S100A13Q99584 98 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 NRDE2Q9H7Z3 1164 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 IARS2Q9NSE4 1012 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 DAPK2Q9UIK4 370 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SNX9Q9Y5X1 595 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 MGAT4DA6NG13 374 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 NDUFB5O43674 189 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 AKR1B1P15121 316 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ATP6V1B2P21281 511 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 EIF2B2P49770 351 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 SIK1P57059 783 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ARF5P84085 180 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 PCSK7Q16549 785 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 NDUFAF6Q330K2 333 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ANKDD1AQ495B1 522 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 BORAQ6PGQ7 559 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ANKS1BQ7Z6G8 1248 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 SVOPQ8N4V2 548 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 APOL4Q9BPW4 351 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 FAM118BQ9BPY3 351 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ATAD3AQ9NVI7 634 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 SLC25A13Q9UJS0 675 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ASTN1O14525 1302 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 PDXKO00764 312 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 SORBS2O94875 1100 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 WARSP23381 471 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 HOXD10P28358 340 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 GRK3P35626 688 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 FDFT1P37268 417 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ENTPD1P49961 510 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 HNMTP50135 292 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 MYBPC1Q00872 1141 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 PRKD1Q15139 912 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ATP6AP1LQ52LC2 224 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 TTC39BQ5VTQ0 682 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 LIN54Q6MZP7 749 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ZCCHC9Q8N567 271 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 CENPIQ92674 756 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 NAT9Q9BTE0 207 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 DCLK3Q9C098 648 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ARMC7Q9H6L4 198 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 NOL6Q9H6R4 1146 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 USP21Q9UK80 565 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 AK5Q9Y6K8 562 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 TRIM49D1C9J1S8 452 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 FOXN3O00409 490 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 PIAS1O75925 651 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 NOS3P29474 1203 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ACADVLP49748 655 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 CAMK2GQ13555 558 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 CCNIQ14094 377 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ZSWIM7Q19AV6 140 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 C2CD6Q53TS8 623 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 THOC7Q6I9Y2 204 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ZCCHC8Q6NZY4 707 aaKnown RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 BNC2Q6ZN30 1099 aaPredicted RBP11.73□□□□□ -0.53
U2AF1-209ENST00000475639 LINC00523Q86TU6 105 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 CENPLQ8N0S6 344 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms