RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DNAJC12Q9UKB3 198 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 SARDHQ9UL12 918 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 PCDHGB2Q9Y5G2 931 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 PLXND1Q9Y4D7 1925 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 ITIH6Q6UXX5 1313 aa7.25□□□□□ -1.25
HDAC3-207ENST00000475549 PKD1L2Q7Z442 2459 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 LOC400499M0QZD8 3231 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PCNX2A6NKB5 2137 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 MUC22E2RYF6 1773 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 SYNJ2BP-COX16A0A087WUM0 186 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 A0A1W2PR77 199 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 GTPBP10A4D1E9 387 aaKnown RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 TMEM8BA6NDV4 472 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 VILLO15195 856 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PCDHGA12O60330 932 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PAGE1O75459 146 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 RNASEH2AO75792 299 aaKnown RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 CNTN5O94779 1100 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 ADCY5O95622 1261 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 FGFR1OPO95684 399 aaKnown RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 CER1O95813 267 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 MT-CO1P00395 513 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 APOEP02649 317 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 ASLP04424 464 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 GLI1P08151 1106 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 HOXB3P14651 431 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PDGFRAP16234 1089 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 GGCXP38435 758 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 GRIA4P48058 902 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 ST8SIA6P61647 398 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 UBE2HP62256 183 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PPP2CBP62714 309 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PPP2CAP67775 309 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 CDK17Q00537 523 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 IL9RQ01113 521 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 SLC6A3Q01959 620 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 SCAPQ12770 1279 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 NME3Q13232 169 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 AUHQ13825 339 aaKnown RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 DPCR1Q3MIW9 517 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 TTC31Q49AM3 519 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 C5orf22Q49AR2 442 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PTPN20Q4JDL3 420 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 ALFQ53S48 1182 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 EFHC1Q5JVL4 640 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 TRNP1Q6NT89 227 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 GBP6Q6ZN66 633 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 CHSY1Q86X52 802 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 FAM71AQ8IYT1 594 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF683Q8IZ20 524 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 MLKLQ8NB16 471 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 RHBDD1Q8TEB9 315 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 GANCQ8TET4 914 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 NT5C3BQ969T7 300 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 SLC6A18Q96N87 628 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 NAA15Q9BXJ9 866 aaKnown RBP7.24□□□□□ -1.25
HDAC3-207ENST00000475549 TMPRSS4Q9NRS4 437 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PIGVQ9NUD9 493 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 ASNSD1Q9NWL6 643 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 DDIT4Q9NX09 232 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 COX16Q9P0S2 106 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PPM1HQ9ULR3 514 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 SCML1Q9UN30 329 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 TBC1D30Q9Y2I9 924 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 PCDHB9Q9Y5E1 797 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 SNX10Q9Y5X0 201 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 HS3ST4Q9Y661 456 aa7.24□□□□□ -1.25
HDAC3-207ENST00000475549 A0A1B0GTQ1 180 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 EDDM13A0A1B0GTR0 161 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 F5H5T6 163 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 K7ERQ8 282 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 M0QYT0 321 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 FLRT2O43155 660 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 LATO43561 262 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ATP9BO43861 1147 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 HSF2BPO75031 334 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 RTN2O75298 545 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CTSLP07711 333 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 SLC2A3P11169 496 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 PYGBP11216 843 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CYP11B1P15538 503 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 GOT1P17174 413 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ABCB4P21439 1286 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 C5AR1P21730 350 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CCR1P32246 355 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 PSMD8P48556 350 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CXCR3P49682 368 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CCR5P51681 352 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ADPRHP54922 357 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 RACK1P63244 317 aaKnown RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 PTK2Q05397 1052 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CAMK2BQ13554 666 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ELAVL3Q14576 367 aaKnown RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 RAB6CQ53S08 254 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 C2CD6Q53TS8 623 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 HSP90AA4PQ58FG1 418 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 OR6B2Q6IFH4 312 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 C11orf57Q6ZUT1 292 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms