RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 STON1Q9Y6Q2 735 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 MUC22E2RYF6 1773 aaPredicted RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 TM4SF5O14894 197 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 IRAK2O43187 625 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
CPSF3-203ENST00000475482 TIMM44O43615 452 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 ACSL4O60488 711 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 NCAM1P13591 858 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 NDUFV2P19404 249 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 HLA-FP30511 346 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 SLC6A4P31645 630 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 TBX4P57082 545 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 CCDC6Q16204 474 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 NADSYN1Q6IA69 706 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 METTL3Q86U44 580 aaKnown RBP16.14■□□□□ 0.17
CPSF3-203ENST00000475482 SPACA7Q96KW9 195 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 CPXM1Q96SM3 734 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 TRIM62Q9BVG3 475 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 L2HGDHQ9H9P8 463 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
CPSF3-203ENST00000475482 TJP2Q9UDY2 1190 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 IP6K2Q9UHH9 426 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 CDC23Q9UJX2 597 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
CPSF3-203ENST00000475482 CACNA1EQ15878 2313 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 SIGLEC16A6NMB1 481 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 CES2O00748 559 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 ENC1O14682 589 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 FTCDO95954 541 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 ATP1A1P05023 1023 aaKnown RBP16.13■□□□□ 0.17
CPSF3-203ENST00000475482 GLI1P08151 1106 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 KRT3P12035 628 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 SCNN1AP37088 669 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 IL12RB1P42701 662 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 SLC11A2P49281 568 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 SGSHP51688 502 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 YWHAZP63104 245 aaKnown RBP16.13■□□□□ 0.17
CPSF3-203ENST00000475482 CREB5Q02930 508 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 CKAP4Q07065 602 aaKnown RBP16.13■□□□□ 0.17
CPSF3-203ENST00000475482 MESDQ14696 234 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 E2F5Q15329 346 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 WHAMMP3Q1A5X7 153 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 TAC4Q86UU9 113 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 UBL4BQ8N7F7 174 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 UCMAQ8WVF2 138 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 FAM149B1Q96BN6 582 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 LMLNQ96KR4 655 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 MRGPRX1Q96LB2 322 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 POPDC2Q9HBU9 364 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 ASNSD1Q9NWL6 643 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 RNF14Q9UBS8 474 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 RAD54BQ9Y620 910 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 ALG6Q9Y672 507 aa16.13■□□□□ 0.17
CPSF3-203ENST00000475482 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 GOLGA6L7A0A1B0GV03 622 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 MED19A0JLT2 244 aaPredicted RBP16.12■□□□□ 0.17
CPSF3-203ENST00000475482 SPOPO43791 374 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 TSPAN3O60637 253 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 ZNF217O75362 1048 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 MAN1A1P33908 653 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 PIGHQ14442 188 aaPredicted RBP16.12■□□□□ 0.17
CPSF3-203ENST00000475482 ZNF234Q14588 700 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 FUT11Q495W5 492 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 PEAR1Q5VY43 1037 aaPredicted RBP16.12■□□□□ 0.17
CPSF3-203ENST00000475482 RFWD3Q6PCD5 774 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 LPCAT2Q7L5N7 544 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 XYLT1Q86Y38 959 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 PGBD3Q8N328 593 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 CEP112Q8N8E3 955 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 C12orf50Q8NA57 414 aaPredicted RBP16.12■□□□□ 0.17
CPSF3-203ENST00000475482 MNS1Q8NEH6 495 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 WFIKKN2Q8TEU8 576 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 PBKQ96KB5 322 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 SLC2A13Q96QE2 648 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 TLR10Q9BXR5 811 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPSF3-203ENST00000475482 MRFAP1Q9Y605 127 aa16.12■□□□□ 0.17
CPSF3-203ENST00000475482 ASCC3Q8N3C0 2202 aaKnown RBP16.12■□□□□ 0.17
CPSF3-203ENST00000475482 FAM170AA1A519 330 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 CCDC66A2RUB6 948 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TMEM191CA6NGB0 347 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TMEM110-MUSTN1A8MSY1 372 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 GOLGA8SH3BPF8 625 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 FANCGO15287 622 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 ERBB2P04626 1255 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 PTGER3P43115 390 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TUBB4BP68371 445 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 ACAP1Q15027 740 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TAF5Q15542 800 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 PTPRNQ16849 979 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 AASDHQ4L235 1098 aaPredicted RBP16.11■□□□□ 0.17
CPSF3-203ENST00000475482 C2CD6Q53TS8 623 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 FAM102AQ5T9C2 384 aaPredicted RBP16.11■□□□□ 0.17
CPSF3-203ENST00000475482 OR6B2Q6IFH4 312 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TCEAL6Q6IPX3 200 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 SLC36A4Q6YBV0 504 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms