RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 LUC7LQ9NQ29 371 aaKnown RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 MPP6Q9NZW5 540 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 EBF1Q9UH73 591 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 AP4E1Q9UPM8 1137 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 A0A1W2PQF6 199 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 RCCD1A6NED2 376 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 GOLGA6L6A8MZA4 724 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 SGK1O00141 431 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 LAMTOR5O43504 91 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 ARSEP51690 589 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 CRY1Q16526 586 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 CA9Q16790 459 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 EOGTQ5NDL2 527 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 POLNQ7Z5Q5 900 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 RASSF3Q86WH2 238 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 CCDC117Q8IWD4 279 aaPredicted RBP17.41■□□□□ 0.38
SCAF11-206ENST00000474828 TXNDC5Q8NBS9 432 aaKnown RBP17.41■□□□□ 0.38
SCAF11-206ENST00000474828 UCMAQ8WVF2 138 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 TSC1Q92574 1164 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 TBC1D31Q96DN5 1066 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 ACOX2Q99424 681 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 EPAS1Q99814 870 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 CACNA1IQ9P0X4 2223 aa17.41■□□□□ 0.38
SCAF11-206ENST00000474828 CHD5Q8TDI0 1954 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 FGF10O15520 208 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 SRGAP2O75044 1071 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 KLF8O95600 359 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 ATP5BP06576 529 aaKnown RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 SRPRAP08240 638 aaKnown RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 SP9P0CG40 484 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 RARAP10276 462 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 MZF1P28698 734 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 TIE1P35590 1138 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 CSKP41240 450 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 DGKEP52429 567 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 SEC13P55735 322 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 SULT2A1Q06520 285 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 ZNF234Q14588 700 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 C6orf118Q5T5N4 469 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 DAB2IPQ5VWQ8 1189 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 TXNRD3NBQ6F5E7 133 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 TMEM92Q6UXU6 159 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 APCDD1Q8J025 514 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 RTL3Q8N8U3 475 aaKnown RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 ZBTB44Q8NCP5 570 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 CCDC112Q8NEF3 446 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 PDLIM2Q96JY6 352 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 PSMB7Q99436 277 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 ACE2Q9BYF1 805 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-206ENST00000474828 IRF2BPLQ9H1B7 796 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 PCSK1NQ9UHG2 260 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 CACNA1HO95180 2353 aa17.4■□□□□ 0.38
SCAF11-206ENST00000474828 POLR2EP19388 210 aaKnown RBP17.39■□□□□ 0.37
SCAF11-206ENST00000474828 IL12RB1P42701 662 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 SLC1A1P43005 524 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 VAV2P52735 878 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 PTPN5P54829 565 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 KRT83P78385 493 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 LRRC38Q5VT99 294 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 LRRC8AQ8IWT6 810 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 UMODL1-AS1Q8N2C9 162 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 KCTD15Q96SI1 283 aaPredicted RBP17.39■□□□□ 0.37
SCAF11-206ENST00000474828 KLC2Q9H0B6 622 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 NOL6Q9H6R4 1146 aaKnown RBP17.39■□□□□ 0.37
SCAF11-206ENST00000474828 NDFIP2Q9NV92 336 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 RCOR3Q9P2K3 495 aaPredicted RBP17.39■□□□□ 0.37
SCAF11-206ENST00000474828 SALL4Q9UJQ4 1053 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 STON1Q9Y6Q2 735 aa17.39■□□□□ 0.37
SCAF11-206ENST00000474828 ZNF487B1APH4 448 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 ARHGAP6O43182 974 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 LILRB5O75023 590 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 ZMPSTE24O75844 475 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 MOCS3O95396 460 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 IL4RP24394 825 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 EPHB2P29323 1055 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 OR1E1P30953 314 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 TAS2R40P59535 323 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 ECT2LQ008S8 904 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 CAMK2GQ13555 558 aaPredicted RBP17.38■□□□□ 0.37
SCAF11-206ENST00000474828 DPYSQ14117 519 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 AFMIDQ63HM1 303 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 TFAP2DQ7Z6R9 452 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 VSIG1Q86XK7 387 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 CPNE8Q86YQ8 564 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 CHPFQ8IZ52 775 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 CCDC33Q8N5R6 958 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 DCAF4L2Q8NA75 395 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 SORCS1Q8WY21 1168 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 CIPCQ9C0C6 399 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 LACRTQ9GZZ8 138 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 MAGEH1Q9H213 219 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 DHX35Q9H5Z1 703 aaKnown RBP17.38■□□□□ 0.37
SCAF11-206ENST00000474828 GPATCH2LQ9NWQ4 482 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 DONSONQ9NYP3 566 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 CWC15Q9P013 229 aaKnown RBP17.38■□□□□ 0.37
SCAF11-206ENST00000474828 ERVW-1Q9UQF0 538 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 HS3ST2Q9Y278 367 aa17.38■□□□□ 0.37
SCAF11-206ENST00000474828 DMDP11532 3685 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 A0A0D9SEW6 157 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 IPO7O95373 1038 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms