RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 C1orf228Q6PIY5 440 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 SPATA31D4Q6ZUB0 917 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 HTR3DQ70Z44 454 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 PCGF5Q86SE9 256 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 IQCKQ8N0W5 287 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 NPWQ8N729 165 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 NAT8LQ8N9F0 302 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 FAM71DQ8N9W8 422 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 TFB1MQ8WVM0 346 aaKnown RBP6.8□□□□□ -1.32
ATG4A-207ENST00000474825 HTR3CQ8WXA8 447 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 RSAD2Q8WXG1 361 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 IFT81Q8WYA0 676 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 MAML1Q92585 1016 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF707Q96C28 371 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-207ENST00000474825 LRRC45Q96CN5 670 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 PKNOX2Q96KN3 472 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 FMO2Q99518 471 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 CDCA3Q99618 268 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-207ENST00000474825 HINFPQ9BQA5 517 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 ZYG11BQ9C0D3 744 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 PRDM12Q9H4Q4 367 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 NOL6Q9H6R4 1146 aaKnown RBP6.8□□□□□ -1.32
ATG4A-207ENST00000474825 PAK5Q9P286 719 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 IGSF9Q9P2J2 1179 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 FAM153AQ9UHL3 310 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 TPX2Q9ULW0 747 aaKnown RBP6.8□□□□□ -1.32
ATG4A-207ENST00000474825 SHOC2Q9UQ13 582 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 HEY1Q9Y5J3 304 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF638Q14966 1978 aaKnown RBP6.8□□□□□ -1.32
ATG4A-207ENST00000474825 CDH23Q9H251 3354 aa6.8□□□□□ -1.32
ATG4A-207ENST00000474825 TMEM265A0A087WTH1 108 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 A0A0A0MRY4 1105 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 E7ESA3 106 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 H7C0C1 242 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SGK1O00141 431 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 KCNN4O15554 427 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MAFKO60675 156 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 LPXNO60711 386 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 OPHN1O60890 802 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 RFPL2O75678 378 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SASH3O75995 380 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 PEX11BO96011 259 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ETS1P14921 441 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 VAV1P15498 845 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 EPCAMP16422 314 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 PTPN2P17706 415 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 HDCP19113 662 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CCNCP24863 283 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ADCY8P40145 1251 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 GARSP41250 739 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CCR2P41597 374 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ATP5OP48047 213 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 IFNAR2P48551 515 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MAPKAPK2P49137 400 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SLC11A2P49281 568 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ITGA8P53708 1063 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 PLTPP55058 493 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 YBEYP58557 167 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 IFI35P80217 286 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CALCOCO2Q13137 446 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SEMA5AQ13591 1074 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 KCNJ11Q14654 390 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CASP8Q14790 479 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 TAF12Q16514 161 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ADGRF1Q5T601 910 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 LRRC31Q6UY01 552 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CHST9Q7L1S5 443 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 GSTA5Q7RTV2 222 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 HDXQ7Z353 690 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 TMC3Q7Z5M5 1100 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ZC3H18Q86VM9 953 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MIB1Q86YT6 1006 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 TP53INP2Q8IXH6 220 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 GSPT2Q8IYD1 628 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ELMOD1Q8N336 334 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CPXM2Q8N436 756 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ZCCHC9Q8N567 271 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MCUQ8NE86 351 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SHKBP1Q8TBC3 707 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CPT1BQ92523 772 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MRPS31Q92665 395 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 PRCCQ92733 491 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 IGSF8Q969P0 613 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 WBP2Q969T9 261 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MYEOVQ96EZ4 313 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 P2RY11Q96G91 374 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CCDC114Q96M63 670 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SPATA13Q96N96 652 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SLC22A12Q96S37 553 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 VAT1Q99536 393 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 LGMNQ99538 433 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CDX2Q99626 313 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 IL12RB2Q99665 862 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SLC46A2Q9BY10 475 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 FRMD8Q9BZ67 464 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 SIK2Q9H0K1 926 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 DPH5Q9H2P9 285 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 EPB41L4BQ9H329 900 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms