RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SH3BP5O60239 455 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 SIN3BO75182 1162 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 GRAP2O75791 330 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 RNASEH2AO75792 299 aaKnown RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 KRT37O76014 449 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 ERBB2P04626 1255 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 FYNP06241 537 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 GLI1P08151 1106 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 SRPRAP08240 638 aaKnown RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 ACSL1P33121 698 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 OXCT1P55809 520 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 RNASE9P60153 205 aaKnown RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 ECT2LQ008S8 904 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 MTA1Q13330 715 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 ASIC2Q16515 512 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 HNRNPA1L2Q32P51 320 aaKnown RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 SARM1Q6SZW1 724 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 TRIM72Q6ZMU5 477 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 MMS22LQ6ZRQ5 1243 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 KIAA0907Q7Z7F0 614 aaPredicted RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 ZDHHC17Q8IUH5 632 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 SKA1Q96BD8 255 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 SLC39A13Q96H72 371 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 RPRD1AQ96P16 312 aaPredicted RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 C6orf106Q9H6K1 298 aaPredicted RBP15.6■□□□□ 0.09
VARS-223ENST00000474643 FBXL12Q9NXK8 326 aa15.6■□□□□ 0.09
VARS-223ENST00000474643 LRRC72A6NJI9 287 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 LRRC53A6NM62 1247 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 GOLGA8SH3BPF8 625 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 HYAL3O43820 417 aaPredicted RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 PROS1P07225 676 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 CDH5P33151 784 aaPredicted RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 PSMD8P48556 350 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 C21orf59P57076 290 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 NOMO3P69849 1222 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 FMO1Q01740 532 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 SLC6A3Q01959 620 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 SULT2A1Q06520 285 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 SLC12A1Q13621 1099 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 SUZ12Q15022 739 aaKnown RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 TRIP6Q15654 476 aaKnown RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 CST6Q15828 149 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 ZNF423Q2M1K9 1284 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 FAM102AQ5T9C2 384 aaPredicted RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 SFMBT2Q5VUG0 894 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 MMAAQ8IVH4 418 aaKnown RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 DEFB106AQ8N104 65 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 TTC17Q96AE7 1141 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 AGPAT1Q99943 283 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 RBSNQ9H1K0 784 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 PABPC3Q9H361 631 aaKnown RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 MTG2Q9H4K7 406 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 TM7SF3Q9NS93 570 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 ASNSD1Q9NWL6 643 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 XPO7Q9UIA9 1087 aaKnown RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 SLC25A13Q9UJS0 675 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 MYO6Q9UM54 1294 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 ERVW-1Q9UQF0 538 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 APOBEC2Q9Y235 224 aaKnown RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.59■□□□□ 0.09
VARS-223ENST00000474643 PAXBP1Q9Y5B6 917 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 CKAP5Q14008 2032 aa15.59■□□□□ 0.09
VARS-223ENST00000474643 MAP1BP46821 2468 aaKnown RBP15.58■□□□□ 0.09
VARS-223ENST00000474643 ASCC3Q8N3C0 2202 aaKnown RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 A0A1B0GVM2 712 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 A0A1B0GVT2 93 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 TCAF2A6NFQ2 919 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 C1QTNF9BB2RNN3 333 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 MID1O15344 667 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 ADH1BP00325 375 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 C1QTNF9P0C862 333 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 CD59P13987 128 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 CHRNB2P17787 502 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 TNFAIP3P21580 790 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 NSFP46459 744 aaKnown RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 CSNK1EP49674 416 aaKnown RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 NUMBP49757 651 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 TAF5Q15542 800 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 HLA-BQ31612 363 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 ACCSLQ4AC99 568 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 C2CD6Q53TS8 623 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 FSCBQ5H9T9 825 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 OLFML1Q6UWY5 402 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 USP30Q70CQ3 517 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 DSG4Q86SJ6 1040 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 CIR1Q86X95 450 aaPredicted RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 KDM1BQ8NB78 822 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 SLC30A5Q8TAD4 765 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 CPLX3Q8WVH0 158 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 BAP1Q92560 729 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 RPL10LQ96L21 214 aaKnown RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 CAMK1GQ96NX5 476 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 EDEM3Q9BZQ6 932 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 XPO4Q9C0E2 1151 aaKnown RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 RSPH9Q9H1X1 276 aaPredicted RBP15.58■□□□□ 0.08
VARS-223ENST00000474643 STAP1Q9ULZ2 295 aa15.58■□□□□ 0.08
VARS-223ENST00000474643 PCDH15Q96QU1 1955 aa15.57■□□□□ 0.08
VARS-223ENST00000474643 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms