RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 PITRM1Q5JRX3 1037 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 BSPRYQ5W0U4 402 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 FAM173BQ6P4H8 233 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 CNNM4Q6P4Q7 775 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 TRIM69Q86WT6 500 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 UNC45BQ8IWX7 931 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 ARL14Q8N4G2 192 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 ANKRD52Q8NB46 1076 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 IFI44Q8TCB0 444 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 PTPRN2Q92932 1015 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 GRAMD1AQ96CP6 724 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 USP29Q9HBJ7 922 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 NLGN3Q9NZ94 848 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 TJP2Q9UDY2 1190 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 PCDHGA8Q9Y5G5 932 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 UBR5O95071 2799 aaPredicted RBP13.72□□□□□ -0.21
RTN4R-206ENST00000474642 NOTCH2Q04721 2471 aa13.72□□□□□ -0.21
RTN4R-206ENST00000474642 ITIH6Q6UXX5 1313 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 RP1P56715 2156 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 A0A1W2PNU3 283 aaPredicted RBP13.71□□□□□ -0.21
RTN4R-206ENST00000474642 CDRT15L2A8MXV6 281 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 SLC7A4O43246 635 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 SUV39H1O43463 412 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 PLRG1O43660 514 aaKnown RBP13.71□□□□□ -0.21
RTN4R-206ENST00000474642 ACSL4O60488 711 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 TGM2P21980 687 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 NNMTP40261 264 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 SLC39A14Q15043 492 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 LINC00303Q3SY05 128 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 FAM133BQ5BKY9 247 aaKnown RBP13.71□□□□□ -0.21
RTN4R-206ENST00000474642 NUGGCQ68CJ6 796 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 MMS22LQ6ZRQ5 1243 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 USP53Q70EK8 1073 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 BHLHA9Q7RTU4 235 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 RPL10LQ96L21 214 aaKnown RBP13.71□□□□□ -0.21
RTN4R-206ENST00000474642 MYOCQ99972 504 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
RTN4R-206ENST00000474642 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 ABCC13Q9NSE7 274 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 STARD5Q9NSY2 213 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 DMAC2Q9NW81 257 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 SEPT3Q9UH03 358 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 ENTPD2Q9Y5L3 495 aa13.71□□□□□ -0.21
RTN4R-206ENST00000474642 NBASA2RRP1 2371 aa13.71□□□□□ -0.22
RTN4R-206ENST00000474642 LRRK2Q5S007 2527 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 LY6G6EA0A0G2JKS1 128 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 CPED1A4D0V7 1026 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 YJEFN3A6XGL0 299 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 E7ENQ6 273 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 SLC31A1O15431 190 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 LZTS3O60299 673 aaPredicted RBP13.7□□□□□ -0.22
RTN4R-206ENST00000474642 RNGTTO60942 597 aaKnown RBP13.7□□□□□ -0.22
RTN4R-206ENST00000474642 TNFSF15O95150 251 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 GJB6O95452 261 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
RTN4R-206ENST00000474642 GIMD1P0DJR0 217 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 GP1BBP13224 206 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 CASP1P29466 404 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 METAP1P53582 386 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
RTN4R-206ENST00000474642 ADIGQ0VDE8 80 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 FSCBQ5H9T9 825 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 FAM46CQ5VWP2 391 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 CEP135Q66GS9 1140 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 SLC9A9Q8IVB4 645 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 SIX6OS1Q8N1H7 587 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 IQUBQ8NA54 791 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 TAS1R2Q8TE23 839 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 EXTL1Q92935 676 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 PRR11Q96HE9 360 aaPredicted RBP13.7□□□□□ -0.22
RTN4R-206ENST00000474642 SPAG5Q96R06 1193 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 CALN1Q9BXU9 219 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 FRMD4BQ9Y2L6 1034 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 U3KQA8 63 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 BOD1L1Q8NFC6 3051 aa13.7□□□□□ -0.22
RTN4R-206ENST00000474642 TEX15Q9BXT5 2789 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 K7ESM1 405 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 TULP2O00295 520 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 SCAMP1O15126 338 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 SFTPCP11686 197 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 VAV1P15498 845 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 GCLMP48507 274 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 STK19P49842 368 aaPredicted RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 VAMP7P51809 220 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 INHBCP55103 352 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 TBX4P57082 545 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 CDKN3Q16667 212 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 GOLGA7BQ2TAP0 167 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 C1orf220Q5T0J3 134 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 ARHGAP17Q68EM7 881 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 NADSYN1Q6IA69 706 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 RBM44Q6ZP01 1051 aaKnown RBP13.69□□□□□ -0.22
RTN4R-206ENST00000474642 APCDD1Q8J025 514 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 CFAP52Q8N1V2 620 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
RTN4R-206ENST00000474642 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms