RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NDST4Q9H3R1 872 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ETNK1Q9HBU6 452 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 TMEM184CQ9NVA4 438 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 PPP4R2Q9NY27 417 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 C5AR2Q9P296 337 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 STX18Q9P2W9 335 aaKnown RBP6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ITGA11Q9UKX5 1188 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNRF3Q9ULT6 936 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 CORO2BQ9UQ03 480 aa6.26□□□□□ -1.41
SMARCE1-208ENST00000474246 ARFGEF2Q9Y6D5 1785 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 NPC1L1Q9UHC9 1359 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 MACROD2A1Z1Q3 448 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 EIF4E1BA6NMX2 242 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 UPK3BL1B0FP48 263 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 UPK3BL2E5RIL1 263 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 GMFGO60234 142 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SPAG6O75602 509 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 IPO13O94829 963 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 STAG3L3P0CL85 134 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CCDC130P13994 396 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PCGF2P35227 344 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 RPS26P62854 115 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 RPP30P78346 268 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CAMK2GQ13555 558 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 UBE3CQ15386 1083 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SMAD2Q15796 467 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SKOR2Q2VWA4 1001 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TEX35Q5T0J7 233 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF658Q5TYW1 1059 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 LILRA6Q6PI73 481 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 METAP1DQ6UB28 335 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CYP2U1Q7Z449 544 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TLK2Q86UE8 772 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 MOGAT3Q86VF5 341 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 MON1AQ86VX9 555 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TPRA1Q86W33 373 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 LRRC6Q86X45 466 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 DNAAF5Q86Y56 855 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CAMK1DQ8IU85 385 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 APLFQ8IW19 511 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SULF2Q8IWU5 870 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TAGAPQ8N103 731 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SLC24A4Q8NFF2 622 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 OR52M1Q8NGK5 317 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TEX47Q8TBZ9 253 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 HASPINQ8TF76 798 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 HPS1Q92902 700 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 WNT8BQ93098 351 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PLD4Q96BZ4 506 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 DEFB118Q96PH6 123 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 KCNC2Q96PR1 638 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PIP5K1AQ99755 562 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM118BQ9BPY3 351 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 GPR62Q9BZJ7 368 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ADAM19Q9H013 955 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SNX15Q9NRS6 342 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PKD2L2Q9NZM6 624 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 MORF4L1Q9UBU8 362 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ASIC3Q9UHC3 531 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CYTH4Q9UIA0 394 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF215Q9UL58 517 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SH3GLB1Q9Y371 365 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 STON1Q9Y6Q2 735 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 FPGT-TNNI3KV9GXZ4 949 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PLXNA3P51805 1871 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 COL3A1P02461 1466 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SERTM2A0A1B0GWG4 89 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ERICH2A1L162 156 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 A8MXE2 369 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 KIF28PB7ZC32 967 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 IGF2BP3O00425 579 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 RRP8O43159 456 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TRAPPC3O43617 180 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PRAMEF12O95522 483 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CYP2E1P05181 493 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 THP07101 528 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 U2AF2P26368 475 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TRHRP34981 398 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SMARCB1Q12824 385 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 GPM6BQ13491 265 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 LPIN1Q14693 890 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 NCAPHQ15003 741 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CHRNA6Q15825 494 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TTMPQ5BVD1 217 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PTRHD1Q6GMV3 140 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF852Q6ZMS4 543 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SZRD1Q7Z422 152 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ASPGQ86U10 573 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 DNAJC10Q8IXB1 793 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PYROXD2Q8N2H3 581 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM133AQ8N9E0 248 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF461Q8TAF7 563 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 FIBINQ8TAL6 211 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF384Q8TF68 577 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 PHKBQ93100 1093 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 RPRD1AQ96P16 312 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 USP28Q96RU2 1077 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 KLF16Q9BXK1 252 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms