RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-206	ENST00000473869	CCNC	P24863	283 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	LMAN1	P49257	510 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	NDST2	P52849	883 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	EIF3B	P55884	814 aa	Known RBP	11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	SMAD3	P84022	425 aa	Known RBP	11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	CYP4F8	P98187	520 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	SLC29A2	Q14542	456 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	ALF	Q53S48	1182 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	FAM133B	Q5BKY9	247 aa	Known RBP	11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	RABGAP1L	Q5R372	815 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	FAM182A	Q5T1J6	154 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	TIGD7	Q6NT04	549 aa	Predicted RBP	11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	ELMSAN1	Q6PJG2	1045 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	RELL1	Q8IUW5	271 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	ZNF567	Q8N184	647 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	MAB21L3	Q8N8X9	362 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	DEPDC1B	Q8WUY9	529 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	TSGA13	Q96PP4	275 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	LRRC3	Q9BY71	257 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	PHACTR1	Q9C0D0	580 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	NDFIP2	Q9NV92	336 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	MSRA	Q9UJ68	235 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	TRHDE	Q9UKU6	1024 aa		11.12	□□□□□ -0.63
TARDBP-206	ENST00000473869	TRAV19	A0A0A6YYK7	116 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869		A0A1W2PRU2	124 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	TCRBV7S3A2	A0A539	114 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	ARHGAP42	A6NI28	874 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	AGPS	O00116	658 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	EIF3H	O15372	352 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	RIPK2	O43353	540 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	XYLB	O75191	536 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	RFPL2	O75678	378 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	TMEM63A	O94886	807 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	ACSL3	O95573	720 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	OLFM2	O95897	454 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	KLKB1	P03952	638 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	EPCAM	P16422	314 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PTPN2	P17706	415 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PTPN3	P26045	913 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	OR1E1	P30953	314 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	HOXA9	P31269	272 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	BMP8B	P34820	402 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	MAGEA4	P43358	317 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	MAGEA6	P43360	314 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	MAPKAPK2	P49137	400 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	IRAK1	P51617	712 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	MLLT1	Q03111	559 aa	Predicted RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PDIA2	Q13087	525 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	RAB30	Q15771	203 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PARP6	Q2NL67	630 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CEP85L	Q5SZL2	805 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	SYCP2L	Q5T4T6	812 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	ADGRF1	Q5T601	910 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	AFMID	Q63HM1	303 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PPP2R2D	Q66LE6	453 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	ITPRIPL1	Q6GPH6	555 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	RFWD3	Q6PCD5	774 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	TTC25	Q96NG3	672 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	SLC22A12	Q96S37	553 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CEP41	Q9BYV8	373 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	RETREG1	Q9H6L5	497 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	AGO1	Q9UL18	857 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CPQ	Q9Y646	472 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CHD7	Q9P2D1	2997 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CDH23	Q9H251	3354 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PER2	O15055	1255 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	NEBL	O76041	1014 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	LATS1	O95835	1130 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	NUDT17	P0C025	328 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PFKL	P17858	780 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	TPSB2	P20231	275 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	SLC6A4	P31645	630 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PAPOLA	P51003	745 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	SARNP	P82979	210 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CDK16	Q00536	496 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	GAD2	Q05329	585 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	SEMA5A	Q13591	1074 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	TPSAB1	Q15661	275 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	KYNU	Q16719	465 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	C5orf22	Q49AR2	442 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	TEX44	Q53QW1	395 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CIR1	Q86X95	450 aa	Predicted RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	ZNF354C	Q86Y25	554 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	ZBED8	Q8IZ13	594 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	OR2W6P	Q8NHA6	318 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	C9orf72	Q96LT7	481 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	AGAP3	Q96P47	875 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	EPB41L4B	Q9H329	900 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	SLC28A3	Q9HAS3	691 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	HCFC1R1	Q9NWW0	138 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	IGSF9	Q9P2J2	1179 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	IPO11	Q9UI26	975 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	LSM7	Q9UK45	103 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	PDE4DIP	Q5VU43	2346 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	DOCK6	Q96HP0	2047 aa		11.11	□□□□□ -0.63
TARDBP-206	ENST00000473869	CHD9	Q3L8U1	2897 aa		11.1	□□□□□ -0.63
TARDBP-206	ENST00000473869	RASA4B	C9J798	803 aa		11.1	□□□□□ -0.63
TARDBP-206	ENST00000473869		F5H423	210 aa	Predicted RBP	11.1	□□□□□ -0.63

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