RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RETP07949 1114 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 FAM228BP0C875 321 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 TGM1P22735 817 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 HNRNPH3P31942 346 aaKnown RBP19.48■□□□□ 0.71
PTCD3-210ENST00000473829 STK19P49842 368 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-210ENST00000473829 PLK1P53350 603 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 ZNF177Q13360 481 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-210ENST00000473829 SLC12A1Q13621 1099 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 E2F5Q15329 346 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 PMS2CLQ68D20 193 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 LRRC31Q6UY01 552 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 NTAN1Q96AB6 310 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 FEM1AQ9BSK4 669 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 RBSNQ9H1K0 784 aa19.48■□□□□ 0.71
PTCD3-210ENST00000473829 RALGAPA1Q6GYQ0 2036 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 CEP192Q8TEP8 1941 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 IGHV1OR15-9A0A0B4J2B8 117 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 ANKRD62A6NC57 917 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 TMEM191CA6NGB0 347 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 EPN2O95208 641 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 MOCS3O95396 460 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 ECT2LQ008S8 904 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 SPEM2Q0P670 501 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 SCAPQ12770 1279 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 TRIM14Q14142 442 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 ARL13BQ3SXY8 428 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 ACBD5Q5T8D3 534 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-210ENST00000473829 RNF219Q5W0B1 726 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-210ENST00000473829 SARM1Q6SZW1 724 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 TMC6Q7Z403 805 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 SPACA7Q96KW9 195 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 RPL10LQ96L21 214 aaKnown RBP19.47■□□□□ 0.71
PTCD3-210ENST00000473829 PSMB7Q99436 277 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 DNAJC7Q99615 494 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 PRDM16Q9HAZ2 1276 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 PRSS16Q9NQE7 514 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 MYO1AQ9UBC5 1043 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 OR12D3Q9UGF7 316 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 SLCO3A1Q9UIG8 710 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 NENFQ9UMX5 172 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 CYP8B1Q9UNU6 501 aa19.47■□□□□ 0.71
PTCD3-210ENST00000473829 NUP205Q92621 2012 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 TTC34A8MYJ7 566 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 RHOCP08134 193 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 NRG1Q02297 640 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-210ENST00000473829 ARID5BQ14865 1188 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 ELF2Q15723 593 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 SCYL2Q6P3W7 929 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 GAS2L3Q86XJ1 694 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 TMPRSS6Q8IU80 811 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 KIAA2013Q8IYS2 634 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 PYROXD2Q8N2H3 581 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 ARFGAP1Q8N6T3 406 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 OR2T3Q8NH03 318 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 ZYG11BQ9C0D3 744 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 OSBPL2Q9H1P3 480 aa19.46■□□□□ 0.71
PTCD3-210ENST00000473829 USP36Q9P275 1121 aaKnown RBP19.46■□□□□ 0.71
PTCD3-210ENST00000473829 PPARGC1AQ9UBK2 798 aaKnown RBP19.46■□□□□ 0.71
PTCD3-210ENST00000473829 CHD5Q8TDI0 1954 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 A0A0D9SEW6 157 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 ZBTB24O43167 697 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-210ENST00000473829 MFAP3LO75121 409 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 LRIG2O94898 1065 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 SRPRAP08240 638 aaKnown RBP19.45■□□□□ 0.7
PTCD3-210ENST00000473829 PSMA2P25787 234 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 EIF4A3P38919 411 aaKnown RBP19.45■□□□□ 0.7
PTCD3-210ENST00000473829 OXCT1P55809 520 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 ST8SIA6P61647 398 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 CCDC6Q16204 474 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 HNRNPA1L2Q32P51 320 aaKnown RBP19.45■□□□□ 0.7
PTCD3-210ENST00000473829 SLFN11Q7Z7L1 901 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 C11orf74Q86VG3 221 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 VPS36Q86VN1 386 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 KDM1BQ8NB78 822 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 TRIM11Q96F44 468 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 LOXL4Q96JB6 756 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 THAP2Q9H0W7 228 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 ARRDC1-AS1Q9H2J1 176 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 NDFIP2Q9NV92 336 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 VPS28Q9UK41 221 aa19.45■□□□□ 0.7
PTCD3-210ENST00000473829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 SNAP91O60641 907 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 SIN3BO75182 1162 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 ZNF217O75362 1048 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 RHOBTB1O94844 696 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 MYBL1P10243 752 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 VAV1P15498 845 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 OR1E1P30953 314 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 ADKP55263 362 aaKnown RBP19.44■□□□□ 0.7
PTCD3-210ENST00000473829 TBX2Q13207 712 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-210ENST00000473829 C9orf64Q5T6V5 341 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 SETD3Q86TU7 594 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-210ENST00000473829 NLRP14Q86W24 1093 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 TMEFF1Q8IYR6 380 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 OR7D4Q8NG98 312 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 OR8K1Q8NGG5 319 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 PRCCQ92733 491 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-210ENST00000473829 ARHGEF26Q96DR7 871 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 SIPA1Q96FS4 1042 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 PEBP4Q96S96 227 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms