RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ALOX15P16050 662 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 SMPD1P17405 629 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CRABP2P29373 138 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 MAGEA12P43365 314 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CCR10P46092 362 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 HARS2P49590 506 aaKnown RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ABCE1P61221 599 aaKnown RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 TBCCQ15814 346 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DCAF4L1Q3SXM0 396 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 SLC9B1Q4ZJI4 515 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 FSTL4Q6MZW2 842 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 PGM2L1Q6PCE3 622 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CATSPER4Q7RTX7 472 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ARHGAP22Q7Z5H3 698 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 HPS6Q86YV9 775 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 GALNT15Q8N3T1 639 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 NME8Q8N427 588 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ARRDC4Q8NCT1 418 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 PPFIBP2Q8ND30 876 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CDKL2Q92772 493 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 TUBGCP5Q96RT8 1024 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 NPY6RQ99463 290 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ECSITQ9BQ95 431 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 EBF3Q9H4W6 596 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 TMEM30AQ9NV96 361 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DCDC2Q9UHG0 476 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 PACSIN3Q9UKS6 424 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 APOBEC2Q9Y235 224 aaKnown RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 G3V2L1 256 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 GOLGA8TH3BQL2 631 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 M0QYT0 321 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 NRP1O14786 923 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DCXO43602 365 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 RNASEH1O60930 286 aaKnown RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CIB2O75838 187 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 TOMM70O94826 608 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 MMP3P08254 477 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ITGAXP20702 1163 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CD68P34810 354 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 SCNN1AP37088 669 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DSG1Q02413 1049 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 BTKQ06187 659 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 TMCO4Q5TGY1 634 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 LPCAT4Q643R3 524 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 PDPK2PQ6A1A2 396 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ZNF410Q86VK4 478 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 EMID1Q96A84 441 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DCPSQ96C86 337 aaKnown RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 APOL2Q9BQE5 337 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 COG4Q9H9E3 785 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 S100A14Q9HCY8 104 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 NDE1Q9NXR1 346 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-214ENST00000473778 CDH22Q9UJ99 828 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ANGPTL2Q9UKU9 493 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DERAQ9Y315 318 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 E9PBE3 544 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 HAX1O00165 279 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 CCNT2O60583 730 aaKnown RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 KLHL41O60662 606 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 LYNP07948 512 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 DESP17661 470 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 PTPN3P26045 913 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 GP5P40197 560 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 COPAP53621 1224 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 AP2B1P63010 937 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 PPIL2Q13356 520 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 DBN1Q16643 649 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 SFT2D3Q587I9 215 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 TCHHL1Q5QJ38 904 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 CERCAMQ5T4B2 595 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 PID1Q7Z2X4 250 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 B3GALNT2Q8NCR0 500 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 HIPK4Q8NE63 616 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 FAM81AQ8TBF8 368 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 ISL2Q96A47 359 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 ZNF669Q96BR6 464 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 HSFY1Q96LI6 401 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 OR52B2Q96RD2 323 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 RBBP8Q99708 897 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 DNAJC28Q9NX36 388 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 G3BP2Q9UN86 482 aaKnown RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 SORCS3Q9UPU3 1222 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 MYLKQ15746 1914 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 XPO1O14980 1071 aaKnown RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 POLBP06746 335 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 CHRNGP07510 517 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 CPA3P15088 417 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 NCF2P19878 526 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 ZBTB17Q13105 803 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 MSLNQ13421 630 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms