RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 POU2F2P09086 479 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 VAV1P15498 845 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 PFKLP17858 780 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 DDX6P26196 483 aaKnown RBP eCLIP11.03□□□□□ -0.64
SP140-208ENST00000473711 KCNC3Q14003 757 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 P3H1Q32P28 736 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 FAM153CQ494X1 144 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 PRSS36Q5K4E3 855 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 RARS2Q5T160 578 aaKnown RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 ADGRF1Q5T601 910 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 HEATR6Q6AI08 1181 aaKnown RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 ZDHHC24Q6UX98 284 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 TFAP2DQ7Z6R9 452 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 NLRP14Q86W24 1093 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 CMTM8Q8IZV2 173 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 LZTR1Q8N653 840 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 LEMD2Q8NC56 503 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 CCHCR1Q8TD31 782 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 DEPDC1BQ8WUY9 529 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 HNRNPLLQ8WVV9 542 aaKnown RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 HTR3CQ8WXA8 447 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 ING5Q8WYH8 240 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 PPP2R3CQ969Q6 453 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 LRRC45Q96CN5 670 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 SNF8Q96H20 258 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 GDAP1L1Q96MZ0 367 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 APOL5Q9BWW9 433 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 PRO3102Q9H379 93 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 ZNF576Q9H609 170 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 PCDH9Q9HC56 1237 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 ARFGAP3Q9NP61 516 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 SEPT10Q9P0V9 454 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 WHRNQ9P202 907 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 FAM153AQ9UHL3 310 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 ANAPC5Q9UJX4 755 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 LSM7Q9UK45 103 aaKnown RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 MRPS23Q9Y3D9 190 aaKnown RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 SH3BP1Q9Y3L3 701 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 RAD54BQ9Y620 910 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 ZFP37Q9Y6Q3 630 aaPredicted RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 LEFTY2O00292 366 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 NCAM2O15394 837 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 LINC01565O15544 149 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 GREM1O60565 184 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 CEBPBP17676 345 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ITIH2P19823 946 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 MX2P20592 715 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ECHS1P30084 290 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ITGA8P53708 1063 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 RPS24P62847 133 aaKnown RBP11.02□□□□□ -0.65
SP140-208ENST00000473711 GALNT2Q10471 571 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 HYAL1Q12794 435 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 CALCOCO2Q13137 446 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
SP140-208ENST00000473711 C5orf22Q49AR2 442 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 MAP9Q49MG5 647 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 BEND6Q5SZJ8 279 aaPredicted RBP11.02□□□□□ -0.65
SP140-208ENST00000473711 IZUMO3Q5VZ72 239 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ARHGAP36Q6ZRI8 547 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 HTR3DQ70Z44 454 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ARHGAP12Q8IWW6 846 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 BBOF1Q8ND07 529 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ITFG1Q8TB96 612 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 AENQ8WTP8 325 aaKnown RBP11.02□□□□□ -0.65
SP140-208ENST00000473711 ART4Q93070 314 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ZSWIM3Q96MP5 696 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 NSUN3Q9H649 340 aaKnown RBP11.02□□□□□ -0.65
SP140-208ENST00000473711 SFXN1Q9H9B4 322 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ZDHHC18Q9NUE0 388 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 TMEM248Q9NWD8 314 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 TPX2Q9ULW0 747 aaKnown RBP11.02□□□□□ -0.65
SP140-208ENST00000473711 CLUHO75153 1309 aa11.02□□□□□ -0.65
SP140-208ENST00000473711 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 C5orf60A6NFR6 353 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 DNALI1O14645 258 aaPredicted RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 GCATO75600 419 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 LATS1O95835 1130 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 ACTN2P35609 894 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 AVPR1AP37288 418 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 GARSP41250 739 aaKnown RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 PAPOLAP51003 745 aaKnown RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 SGSHP51688 502 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 NDST2P52849 883 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 PPIDQ08752 370 aaKnown RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 CBX2Q14781 532 aaPredicted RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 RABGAP1LQ5R372 815 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 AFMIDQ63HM1 303 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 Q6ZNB5 142 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 CCDC13Q8IYE1 715 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 UMODL1-AS1Q8N2C9 162 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 EIF1ADQ8N9N8 165 aaKnown RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 FBXO25Q8TCJ0 367 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms