RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 COQ4Q9Y3A0 265 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 EDDM13A0A1B0GTR0 161 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 TARSL2A2RTX5 802 aaKnown RBP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 IRAK2O43187 625 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 RNASEH1O60930 286 aaKnown RBP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 LUC7L3O95232 432 aaKnown RBP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 MT-CO3P00414 261 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 IL1BP01584 269 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 ASLP04424 464 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 VDRP11473 427 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 CMA1P23946 247 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 ACP1P24666 158 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 ARRB1P49407 418 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 IRAK1P51617 712 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 SLC8A3P57103 927 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 TAS2R38P59533 333 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 ECT2LQ008S8 904 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 LY6DQ14210 128 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 RAP1GAP2Q684P5 730 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 NAPEPLDQ6IQ20 393 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 UNC45BQ8IWX7 931 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 LGI2Q8N0V4 545 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 MFSD2AQ8NA29 543 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 FAM131CQ96AQ9 280 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 HIC2Q96JB3 615 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 MYOCQ99972 504 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF4-209ENST00000473421 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 ERVMER34-1Q9H9K5 563 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 CYTH4Q9UIA0 394 aa13.04□□□□□ -0.32
TRAF4-209ENST00000473421 MAST4O15021 2626 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 TEX51A0A1B0GUA7 166 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 PMS2P1A4D2B8 440 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 SRPRAP08240 638 aaKnown RBP13.03□□□□□ -0.32
TRAF4-209ENST00000473421 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 C5AR1P21730 350 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
TRAF4-209ENST00000473421 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 CDH18Q13634 790 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
TRAF4-209ENST00000473421 DCAF17Q5H9S7 520 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-209ENST00000473421 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 AGBL4Q5VU57 503 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 NUGGCQ68CJ6 796 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 TMEM270Q6UE05 265 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 TAC4Q86UU9 113 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 LSM14AQ8ND56 463 aaKnown RBP13.03□□□□□ -0.32
TRAF4-209ENST00000473421 BAP1Q92560 729 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 AZIN2Q96A70 460 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 NOX5Q96PH1 765 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 U3KQA8 63 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 MYO18BQ8IUG5 2567 aa13.03□□□□□ -0.32
TRAF4-209ENST00000473421 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.32
TRAF4-209ENST00000473421 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.32
TRAF4-209ENST00000473421 A0A1B0GVM2 712 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 J3QKU1 62 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 M0QYV0 167 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 FFAR2O15552 330 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 CDK4P11802 303 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 PDGFRAP16234 1089 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 PRLRP16471 622 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 DGKAP23743 735 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 ILKQ13418 452 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 CDCP2Q5VXM1 449 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 TMC6Q7Z403 805 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 IRGQQ8WZA9 623 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 SKA1Q96BD8 255 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 ALG14Q96F25 216 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 DNAI2Q9GZS0 605 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 OSBPL2Q9H1P3 480 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 FZD3Q9NPG1 666 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 TJP2Q9UDY2 1190 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 TLR6Q9Y2C9 796 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 ZDHHC9Q9Y397 364 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 CEP83Q9Y592 693 aa13.02□□□□□ -0.33
TRAF4-209ENST00000473421 FAM237AA0A1B0GTK4 181 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 SLC31A1O15431 190 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 YKT6O15498 198 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
TRAF4-209ENST00000473421 OPA1O60313 960 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 ADH1BP00325 375 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 TACR2P21452 398 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 ACTN2P35609 894 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 PRCPP42785 496 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 SYKP43405 635 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-209ENST00000473421 TAF5Q15542 800 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 CNGA2Q16280 664 aa13.01□□□□□ -0.33
TRAF4-209ENST00000473421 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms