RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 DHX40Q8IX18 779 aaKnown RBP13.97□□□□□ -0.17
CHD3-209ENST00000473376 C1orf131Q8NDD1 294 aaKnown RBP13.97□□□□□ -0.17
CHD3-209ENST00000473376 GANCQ8TET4 914 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 MYEOVQ96EZ4 313 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 ELF4Q99607 663 aaPredicted RBP13.97□□□□□ -0.17
CHD3-209ENST00000473376 SCUBE2Q9NQ36 999 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 KIAA1468Q9P260 1216 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 CYTH4Q9UIA0 394 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 SLCO3A1Q9UIG8 710 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 DMTF1Q9Y222 760 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 CABIN1Q9Y6J0 2220 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 CXorf51AA0A1B0GTR3 108 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 A0A1W2PP55 124 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 A0A1W2PR77 199 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 TTC34A8MYJ7 566 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 H0Y8X5 98 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 ATP9BO43861 1147 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 RNGTTO60942 597 aaKnown RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 CLDN11O75508 207 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 RNASEH2AO75792 299 aaKnown RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 MZF1P28698 734 aaPredicted RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 SCNN1AP37088 669 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 ARRB1P49407 418 aaPredicted RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 ADPRHP54922 357 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 BPIFB4P59827 614 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 PTK2Q05397 1052 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 CCDC15Q0P6D6 951 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 EXOC3L4Q17RC7 722 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 RAP1GAP2Q684P5 730 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 C11orf57Q6ZUT1 292 aaPredicted RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 SLC26A9Q7LBE3 791 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 CCAR2Q8N163 923 aaKnown RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 CACTIN-AS1Q8N1I8 211 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 CFAP52Q8N1V2 620 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 WDTC1Q8N5D0 677 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 PNPLA1Q8N8W4 532 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 MFSD2AQ8NA29 543 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 ADAM32Q8TC27 787 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 FRS2Q8WU20 508 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 PPP1R13BQ96KQ4 1090 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 GDF3Q9NR23 364 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 XPO7Q9UIA9 1087 aaKnown RBP13.96□□□□□ -0.17
CHD3-209ENST00000473376 TBC1D30Q9Y2I9 924 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 GPSM3Q9Y4H4 160 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 CEP83Q9Y592 693 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 PAXBP1Q9Y5B6 917 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 SLCO1B1Q9Y6L6 691 aa13.96□□□□□ -0.17
CHD3-209ENST00000473376 ANKRD11Q6UB99 2663 aaPredicted RBP13.96□□□□□ -0.18
CHD3-209ENST00000473376 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 KNL1Q8NG31 2342 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 BECN2A8MW95 431 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 MCF2LO15068 1137 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 MOCS2O96007 188 aaPredicted RBP13.95□□□□□ -0.18
CHD3-209ENST00000473376 F9P00740 461 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 NOS2P35228 1153 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 ILKQ13418 452 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 KCNJ12Q14500 433 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 BRMS1LQ5PSV4 323 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 CXorf57Q6NSI4 855 aaKnown RBP13.95□□□□□ -0.18
CHD3-209ENST00000473376 FBXL22Q6P050 247 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 NEK5Q6P3R8 708 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 TRIM69Q86WT6 500 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 APCDD1Q8J025 514 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 AADATQ8N5Z0 425 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
CHD3-209ENST00000473376 MLKLQ8NB16 471 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 ALG14Q96F25 216 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 PGAP3Q96FM1 320 aaPredicted RBP13.95□□□□□ -0.18
CHD3-209ENST00000473376 FEM1AQ9BSK4 669 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 DDIT4Q9NX09 232 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 SERGEFQ9UGK8 458 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 PPM1HQ9ULR3 514 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 LHX6Q9UPM6 363 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 BTBD3Q9Y2F9 522 aa13.95□□□□□ -0.18
CHD3-209ENST00000473376 COL5A1P20908 1838 aaPredicted RBP13.94□□□□□ -0.18
CHD3-209ENST00000473376 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.94□□□□□ -0.18
CHD3-209ENST00000473376 TLR4O00206 839 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 BIN1O00499 593 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 CALCAP01258 141 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 PON1P27169 355 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 DRD3P35462 400 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 CTSOP43234 321 aaPredicted RBP13.94□□□□□ -0.18
CHD3-209ENST00000473376 CDH4P55283 916 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 STX17P56962 302 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 ZNF177Q13360 481 aaPredicted RBP13.94□□□□□ -0.18
CHD3-209ENST00000473376 CAMK2BQ13554 666 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 AUHQ13825 339 aaKnown RBP13.94□□□□□ -0.18
CHD3-209ENST00000473376 KCNT1Q5JUK3 1230 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 NAPEPLDQ6IQ20 393 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 OLFML1Q6UWY5 402 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 MMS22LQ6ZRQ5 1243 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 ARCQ7LC44 396 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 PRPF39Q86UA1 669 aaKnown RBP13.94□□□□□ -0.18
CHD3-209ENST00000473376 DEFB106AQ8N104 65 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 STK40Q8N2I9 435 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 SAP25Q8TEE9 199 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 OR8D1Q8WZ84 308 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms