RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 MIPP30301 263 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 ADRA1BP35368 520 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 EIF2DP41214 584 aaKnown RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 GALK1P51570 392 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 IRAK1P51617 712 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CCZ1BP86790 482 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 MTA1Q13330 715 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 AUHQ13825 339 aaKnown RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 TMEM196Q5HYL7 178 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 GRAMD4Q6IC98 578 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 FSTL4Q6MZW2 842 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 FBXL22Q6P050 247 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 C14orf80Q86SX3 495 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 KIAA1328Q86T90 577 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 CPNE8Q86YQ8 564 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 LRRC8AQ8IWT6 810 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 RHOT2Q8IXI1 618 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CCDC105Q8IYK2 499 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CFAP52Q8N1V2 620 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CCDC112Q8NEF3 446 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 PJA1Q8NG27 643 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 WFDC5Q8TCV5 224 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 PBXIP1Q96AQ6 731 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 PDLIM2Q96JY6 352 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 RPRD1AQ96P16 312 aaPredicted RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 PEBP4Q96S96 227 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 MAGEB5Q9BZ81 275 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 FBRSL1Q9HCM7 1045 aaKnown RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 GPATCH2LQ9NWQ4 482 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 PCSK1NQ9UHG2 260 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 CLEC4EQ9ULY5 219 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 MRPS17Q9Y2R5 130 aaKnown RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 MTF2Q9Y483 593 aaPredicted RBP9.38□□□□□ -0.91
SMC4-214ENST00000472991 FANCMQ8IYD8 2048 aa9.38□□□□□ -0.91
SMC4-214ENST00000472991 A0A1B0GVM2 712 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 TCAF2A6NFQ2 919 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 E9PAM4 449 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 ARHGAP6O43182 974 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 PRPSAP2O60256 369 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 MTA2O94776 668 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 LUC7L3O95232 432 aaKnown RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 KAT7O95251 611 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 EGFP01133 1207 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 APODP05090 189 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 TCF4P15884 667 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 GJC1P36383 396 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 DGKGP49619 791 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 VAV2P52735 878 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 SCAPQ12770 1279 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 GRSF1Q12849 480 aaKnown RBP eCLIP9.37□□□□□ -0.912e-14■■■■■ 48.8
SMC4-214ENST00000472991 MESDQ14696 234 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 ACAP1Q15027 740 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 EFHC2Q5JST6 749 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 TTC39BQ5VTQ0 682 aaPredicted RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 LYPD4Q6UWN0 246 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 CYP4V2Q6ZWL3 525 aaPredicted RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 SFTPA1Q8IWL2 248 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 ZNF683Q8IZ20 524 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 PYROXD2Q8N2H3 581 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 CARNMT1Q8N4J0 409 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 TERB1Q8NA31 727 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 EZH1Q92800 747 aaPredicted RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 IGSF8Q969P0 613 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 EXOC4Q96A65 974 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 HAPLN3Q96S86 360 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 PNKPQ96T60 521 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 SNRNP25Q9BV90 132 aaKnown RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 RBM12Q9NTZ6 932 aaKnown RBP9.37□□□□□ -0.91
SMC4-214ENST00000472991 DEC1Q9P2X7 70 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 FZD10Q9ULW2 581 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 USP18Q9UMW8 372 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 AP4E1Q9UPM8 1137 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
SMC4-214ENST00000472991 A0A0U1RQJ8 604 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 ANTXRLA6NF34 631 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 PRR33A8MZF0 331 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 FAM72CH0Y354 149 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 H0Y626 953 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 PJA2O43164 708 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 PI15O43692 258 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 NRDCO43847 1150 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 SRGAP2O75044 1071 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 CNTN5O94779 1100 aa9.36□□□□□ -0.91
SMC4-214ENST00000472991 PROSCO94903 275 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms