RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 DPY19L2P1Q6NXN4 242 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 SLC26A9Q7LBE3 791 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 STK40Q8N2I9 435 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 KDF1Q8NAX2 398 aaPredicted RBP23.24■■□□□ 1.31
C9orf3-213ENST00000471978 IGSF8Q969P0 613 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 FAM129BQ96TA1 746 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 OMDQ99983 421 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 NEUROG2Q9H2A3 272 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 PDCL3Q9H2J4 239 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 PCOLCE2Q9UKZ9 415 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 MSRB2Q9Y3D2 182 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 SNX11Q9Y5W9 270 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 M0QYT0 321 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 CBFA2T3O75081 653 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 FTH1P19P0C7X4 201 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 NOS2P35228 1153 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 PSMD8P48556 350 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 PLK1P53350 603 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 GALCP54803 685 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 CENPCQ03188 943 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 CXorf57Q6NSI4 855 aaKnown RBP23.23■■□□□ 1.31
C9orf3-213ENST00000471978 NCEH1Q6PIU2 408 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 LAYNQ6UX15 382 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 RAB44Q7Z6P3 723 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-213ENST00000471978 ZNF397Q8NF99 534 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-213ENST00000471978 PTPRN2Q92932 1015 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 ORAI3Q9BRQ5 295 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 NUP62CLQ9H1M0 184 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 ZMIZ1Q9ULJ6 1067 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 VANGL2Q9ULK5 521 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 FZD4Q9ULV1 537 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 PCDHGB2Q9Y5G2 931 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 HS3ST4Q9Y661 456 aa23.23■■□□□ 1.31
C9orf3-213ENST00000471978 KNL1Q8NG31 2342 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 TMEM8BA6NDV4 472 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 LRRC72A6NJI9 287 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 PES1O00541 588 aaKnown RBP23.22■■□□□ 1.31
C9orf3-213ENST00000471978 KCNMA1Q12791 1236 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 DRAP1Q14919 205 aaPredicted RBP23.22■■□□□ 1.31
C9orf3-213ENST00000471978 ADAT2Q7Z6V5 191 aaKnown RBP23.22■■□□□ 1.31
C9orf3-213ENST00000471978 ZDHHC17Q8IUH5 632 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 TMEM35BQ8NCS4 154 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 PPP1R9BQ96SB3 815 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 ADAMTS1Q9UHI8 967 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 FHOD1Q9Y613 1164 aa23.22■■□□□ 1.31
C9orf3-213ENST00000471978 DMXL2Q8TDJ6 3036 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 PAGE1O75459 146 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 ADH1BP00325 375 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 IL1BP01584 269 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 VAV1P15498 845 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 CYP11B1P15538 503 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 GGCXP38435 758 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 IRAK1P51617 712 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 RNASE9P60153 205 aaKnown RBP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 ZNF177Q13360 481 aaPredicted RBP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 KCNJ12Q14500 433 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 ELAVL3Q14576 367 aaKnown RBP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 SUZ12Q15022 739 aaKnown RBP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 KLHDC7AQ5VTJ3 777 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 LRSAM1Q6UWE0 723 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 DBX2Q6ZNG2 339 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 SND1Q7KZF4 910 aaKnown RBP eCLIP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 GLRX5Q86SX6 157 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 AADATQ8N5Z0 425 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 PNPLA1Q8N8W4 532 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 OR2T34Q8NGX1 318 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 RHBDD1Q8TEB9 315 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 RRN3Q9NYV6 651 aa23.21■■□□□ 1.31
C9orf3-213ENST00000471978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.21■■□□□ 1.31
C9orf3-213ENST00000471978 FREM2Q5SZK8 3169 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 A0A1W2PPC4 97 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 FAM221BA6H8Z2 402 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 KCNK3O14649 394 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 FLRT2O43155 660 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 GOT1P17174 413 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 C5AR1P21730 350 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 RACK1P63244 317 aaKnown RBP23.2■■□□□ 1.3
C9orf3-213ENST00000471978 KCNT1Q5JUK3 1230 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 OTUD1Q5VV17 481 aaPredicted RBP23.2■■□□□ 1.3
C9orf3-213ENST00000471978 C14orf80Q86SX3 495 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 ADAMTS14Q8WXS8 1223 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 ALG14Q96F25 216 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 NPY6RQ99463 290 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 FEM1AQ9BSK4 669 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 SIK2Q9H0K1 926 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 SAMSN1Q9NSI8 373 aaKnown RBP23.2■■□□□ 1.3
C9orf3-213ENST00000471978 PIGVQ9NUD9 493 aa23.2■■□□□ 1.3
C9orf3-213ENST00000471978 APOBEC2Q9Y235 224 aaKnown RBP23.2■■□□□ 1.3
C9orf3-213ENST00000471978 CLDN11O75508 207 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 CDH5P33151 784 aaPredicted RBP23.19■■□□□ 1.3
C9orf3-213ENST00000471978 TAF3Q5VWG9 929 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 OR52K2Q8NGK3 314 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 OR14C36Q8NHC7 312 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 FRS2Q8WU20 508 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 C18orf8Q96DM3 657 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 SLC6A18Q96N87 628 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 SPAG5Q96R06 1193 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 ACE2Q9BYF1 805 aaPredicted RBP23.19■■□□□ 1.3
C9orf3-213ENST00000471978 WDCPQ9H6R7 721 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms