RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ACVRL1P37023 503 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 C2orf54Q08AI8 447 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 MPP7Q5T2T1 576 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 AFMIDQ63HM1 303 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 RNF43Q68DV7 783 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 UMODL1-AS1Q8N2C9 162 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 MAIP1Q8WWC4 291 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 ATP2A3Q93084 1043 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 LRRC19Q9H756 370 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 PRDM16Q9HAZ2 1276 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 RBM12Q9NTZ6 932 aaKnown RBP19.7■□□□□ 0.74
PSPC1-203ENST00000471658 MARK1Q9P0L2 795 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 A0A0D9SEW6 157 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 NFATC1O95644 943 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 RHOCP08134 193 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 ADH5P11766 374 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 MAPKAPK2P49137 400 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 RUNX3Q13761 415 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 NOMO1Q15155 1222 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 GAB4Q2WGN9 574 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 ARHGAP36Q6ZRI8 547 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 ZC3H18Q86VM9 953 aaKnown RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 MFN1Q8IWA4 741 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 SLC44A3Q8N4M1 653 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 LRRN4CLQ8ND94 238 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 SPATA4Q8NEY3 305 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 OR7D4Q8NG98 312 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 DNPEPQ9ULA0 475 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 FAM50BQ9Y247 325 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 TBC1D30Q9Y2I9 924 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 KIF26AQ9ULI4 1882 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 LOC730098B7Z3J9 87 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 RASA4BC9J798 803 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 DFFAO00273 331 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 ARNTLO00327 626 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 RASA4O43374 803 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 MZF1P28698 734 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 KCNJ1P48048 391 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 PAPOLAP51003 745 aaKnown RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 EIF3EP60228 445 aaKnown RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 CKAP4Q07065 602 aaKnown RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 RNF219Q5W0B1 726 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 NAIF1Q69YI7 327 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-203ENST00000471658 TTC27Q6P3X3 843 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 C12orf40Q86WS4 652 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 HMCESQ96FZ2 354 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 BRD9Q9H8M2 597 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 THEGQ9P2T0 379 aa19.69■□□□□ 0.74
PSPC1-203ENST00000471658 LIASO43766 372 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 RAMP2O60895 175 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 ADH1CP00326 375 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 CD70P32970 193 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 SERPINB6P35237 376 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 SLC6A11P48066 632 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 GAD2Q05329 585 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 CDH18Q13634 790 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 POLD3Q15054 466 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-203ENST00000471658 CCNG2Q16589 344 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 ZNF572Q7Z3I7 529 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-203ENST00000471658 KLHL7Q8IXQ5 586 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 LZTR1Q8N653 840 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 TTC13Q8NBP0 860 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 FIBINQ8TAL6 211 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 SLC35B2Q8TB61 432 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 MAGOHBQ96A72 148 aaKnown RBP19.68■□□□□ 0.74
PSPC1-203ENST00000471658 OLFM3Q96PB7 478 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 LGMNQ99538 433 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 DDX47Q9H0S4 455 aaKnown RBP19.68■□□□□ 0.74
PSPC1-203ENST00000471658 NUP205Q92621 2012 aa19.68■□□□□ 0.74
PSPC1-203ENST00000471658 H7C0C1 242 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 HOXC11O43248 304 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-203ENST00000471658 CSKP41240 450 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 ATP5OP48047 213 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 NR2C2P49116 596 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 NDST2P52849 883 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 GNA12Q03113 381 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 GALNT2Q10471 571 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 LMAN2Q12907 356 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 C6orf118Q5T5N4 469 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 SETD3Q86TU7 594 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-203ENST00000471658 ARHGEF2Q92974 986 aaKnown RBP19.67■□□□□ 0.74
PSPC1-203ENST00000471658 LMLNQ96KR4 655 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 RETREG1Q9H6L5 497 aa19.67■□□□□ 0.74
PSPC1-203ENST00000471658 ILVBLA1L0T0 632 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 RBP3P10745 1247 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 HLA-FP30511 346 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 SOX9P48436 509 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 MRPS25P82663 173 aaKnown RBP19.66■□□□□ 0.74
PSPC1-203ENST00000471658 MESP2Q0VG99 397 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 CYP1B1Q16678 543 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 APCDD1Q8J025 514 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 CPA6Q8N4T0 437 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 CCNYQ8ND76 341 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 CHFRQ96EP1 664 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 ALG14Q96F25 216 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 SPON2Q9BUD6 331 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 ABCB8Q9NUT2 735 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 IGSF9Q9P2J2 1179 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 OR51B4Q9Y5P0 310 aa19.66■□□□□ 0.74
PSPC1-203ENST00000471658 GOLGA6L10A0A0M3HER8 536 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms