RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MAML1Q92585 1016 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 RNF34Q969K3 372 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 TMA16Q96EY4 203 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 HMCESQ96FZ2 354 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 MRGPRX3Q96LB0 322 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 TSGA13Q96PP4 275 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 AP1M1Q9BXS5 423 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 SLITRK6Q9H5Y7 841 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 CD248Q9HCU0 757 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 RBM12Q9NTZ6 932 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 DUS2Q9NX74 493 aaKnown RBP10.16□□□□□ -0.78
SF3A1-207ENST00000471342 DNPEPQ9ULA0 475 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 ZNF510Q9Y2H8 683 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 SH3BP1Q9Y3L3 701 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 TRIOO75962 3097 aa10.16□□□□□ -0.78
SF3A1-207ENST00000471342 A0A1B0GVM2 712 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TCAF2A6NFQ2 919 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 H3BRJ5 948 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 J3KR12 359 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 APOC4-APOC2K7ER74 178 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 KIF2AO00139 706 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TBL1XO60907 577 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 LUC7L3O95232 432 aaKnown RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 APOC2P02655 101 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 MSNP26038 577 aaKnown RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 GJA4P35212 333 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 KCNJ1P48048 391 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 SOX9P48436 509 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TPI1P60174 286 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 OTUD4Q01804 1114 aaKnown RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 MTA1Q13330 715 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 SERINC3Q13530 473 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 PTPRNQ16849 979 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 FUT11Q495W5 492 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 MPPE1Q53F39 396 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 ACBD5Q5T8D3 534 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 KAZNQ674X7 775 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TPGS1Q6ZTW0 290 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 SND1Q7KZF4 910 aaKnown RBP eCLIP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 ADHFE1Q8IWW8 467 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 PGBD5Q8N414 524 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TEX26Q8N6G2 289 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 SPATA4Q8NEY3 305 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 NXPE3Q969Y0 559 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 E2F7Q96AV8 911 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TADA1Q96BN2 335 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 RTP4Q96DX8 246 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 CELF6Q96J87 481 aaKnown RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 RPGRIP1Q96KN7 1286 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 RPRD1AQ96P16 312 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-207ENST00000471342 FEM1AQ9BSK4 669 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 CALN1Q9BXU9 219 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 NACA2Q9H009 215 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 RETREG1Q9H6L5 497 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 TBC1D14Q9P2M4 693 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 DOCK4Q8N1I0 1966 aa10.15□□□□□ -0.78
SF3A1-207ENST00000471342 ILVBLA1L0T0 632 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 RASA4BC9J798 803 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 F5H5T6 163 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 FGF10O15520 208 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 RASA4O43374 803 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CLDN11O75508 207 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 MT-CO1P00395 513 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 C7P10643 843 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 TYRP14679 529 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CD68P34810 354 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CHKAP35790 457 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CSKP41240 450 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 GARSP41250 739 aaKnown RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 MAPKAPK2P49137 400 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 NUMBP49757 651 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 PAPOLAP51003 745 aaKnown RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 NDST2P52849 883 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 DYNLT1P63172 113 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 MRPS25P82663 173 aaKnown RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 RUNX3Q13761 415 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 PDGFRLQ15198 375 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CYTH1Q15438 398 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
SF3A1-207ENST00000471342 TRADDQ15628 312 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CCNG2Q16589 344 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 C1orf228Q6PIY5 440 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 KIF18AQ8NI77 898 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 C1orf54Q8WWF1 131 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 SLCO2A1Q92959 643 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 BHMTQ93088 406 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 FATE1Q969F0 183 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 TTC17Q96AE7 1141 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 HAUS1Q96CS2 278 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 CAPZA3Q96KX2 299 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 LGMNQ99538 433 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 EPAS1Q99814 870 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 PRDM16Q9HAZ2 1276 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 SLC2A4RGQ9NR83 387 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 SLC27A6Q9Y2P4 619 aa10.14□□□□□ -0.79
SF3A1-207ENST00000471342 BCLAF3A2AJT9 711 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 K7ERQ8 282 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 APOL1O14791 398 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms