RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ITIH5Q86UX2 942 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 CIR1Q86X95 450 aaPredicted RBP18.58■□□□□ 0.56
SMC4-211ENST00000469858 AGGF1Q8N302 714 aaeCLIP18.58■□□□□ 0.562e-85■■■■■ 286.7
SMC4-211ENST00000469858 KLHL5Q96PQ7 755 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 RNF38Q9H0F5 515 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 TMEM248Q9NWD8 314 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 CTNNAL1Q9UBT7 734 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 RSPH14Q9UHP6 348 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 TEX264Q9Y6I9 313 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 EXOC1LA0A1B0GW35 172 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 OAS1P00973 400 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 JCHAINP01591 159 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TACR2P21452 398 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 CCNCP24863 283 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 PHBP35232 272 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 GRIA1P42261 906 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 PPP3CCP48454 512 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 ATP1A2P50993 1020 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 ZNF33AQ06730 810 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 MTA1Q13330 715 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TERF2Q15554 542 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TEX44Q53QW1 395 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 ACBD5Q5T8D3 534 aaPredicted RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 PLPP4Q5VZY2 271 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 AFMIDQ63HM1 303 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 C3orf62Q6ZUJ4 267 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TMEM150AQ86TG1 271 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 USP33Q8TEY7 942 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 DPF3Q92784 378 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TLCD1Q96CP7 247 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TSGA13Q96PP4 275 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 VAT1Q99536 393 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 LBHD1Q9BQE6 289 aaPredicted RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 MTIF3Q9H2K0 278 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 TRPC7Q9HCX4 862 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 GKN1Q9NS71 199 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TRHDEQ9UKU6 1024 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 F5H5T6 163 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 ACSL4O60488 711 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 MAFKO60675 156 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 TCEA3O75764 348 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 LRG1P02750 347 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 IRF1P10914 325 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 PAPOLAP51003 745 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 SARNPP82979 210 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 DENND1CQ8IV53 801 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 LGI2Q8N0V4 545 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 PLD4Q96BZ4 506 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 MYEOVQ96EZ4 313 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 GBA3Q9H227 469 aa18.57■□□□□ 0.56
SMC4-211ENST00000469858 NOL6Q9H6R4 1146 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 XAB2Q9HCS7 855 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 EIF2B3Q9NR50 452 aaKnown RBP18.57■□□□□ 0.56
SMC4-211ENST00000469858 DENND4CQ5VZ89 1909 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 LINC01553A4QN01 128 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 STC2O76061 302 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 C8AP07357 584 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 CCNB1P14635 433 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 CD68P34810 354 aaPredicted RBP18.56■□□□□ 0.56
SMC4-211ENST00000469858 MAGEA3P43357 314 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 SLC11A2P49281 568 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 IFI35P80217 286 aaPredicted RBP18.56■□□□□ 0.56
SMC4-211ENST00000469858 CDK16Q00536 496 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 ITPRIPL1Q6GPH6 555 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 RFWD3Q6PCD5 774 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 LILRA6Q6PI73 481 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 SPRED2Q7Z698 418 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 UMODL1-AS1Q8N2C9 162 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 ZSCAN18Q8TBC5 510 aaPredicted RBP18.56■□□□□ 0.56
SMC4-211ENST00000469858 POF1BQ8WVV4 589 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 C17orf80Q9BSJ5 609 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 EMILIN2Q9BXX0 1053 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 DONSONQ9NYP3 566 aa18.56■□□□□ 0.56
SMC4-211ENST00000469858 ARHGAP42A6NI28 874 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 DRGXA6NNA5 263 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 HIDE1A8MVS5 230 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 POC1B-GALNT4F8VUJ3 575 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 AGTP01019 485 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 F11P03951 625 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 NFKB1P19838 968 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 DNAJB1P25685 340 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 SLC6A4P31645 630 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 NDST2P52849 883 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 FAM133BQ5BKY9 247 aaKnown RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 KDM7AQ6ZMT4 941 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 KREMEN2Q8NCW0 462 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 CFAP36Q96G28 342 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 TEKT5Q96M29 485 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 GORASP1Q9BQQ3 440 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 HTATIP2Q9BUP3 242 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 STMN4Q9H169 189 aaPredicted RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 IL21Q9HBE4 155 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 SMPD4Q9NXE4 827 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 TBK1Q9UHD2 729 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 LZTS1Q9Y250 596 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 MTCL1Q9Y4B5 1905 aaKnown RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 CDH16O75309 829 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 MBL2P11226 248 aaPredicted RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 CBLBQ13191 982 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms