RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 FAM91A1Q658Y4 838 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 TMEM86AQ8N2M4 240 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 TEX9Q8N6V9 391 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 ACVR1CQ8NER5 493 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 MCUR1Q96AQ8 359 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 PGAP3Q96FM1 320 aaPredicted RBP15.02□□□□□ -0.01
CBWD3-205ENST00000469687 SMARCD1Q96GM5 515 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 RSRC1Q96IZ7 334 aaKnown RBP15.02□□□□□ -0.01
CBWD3-205ENST00000469687 RILPQ96NA2 401 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 NAT9Q9BTE0 207 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 CCDC106Q9BWC9 280 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 YY1AP1Q9H869 796 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 CAB39LQ9H9S4 337 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 SNX15Q9NRS6 342 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 TXNDC16Q9P2K2 825 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 CDH9Q9ULB4 789 aa15.02□□□□□ -0.01
CBWD3-205ENST00000469687 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.02□□□□□ -0.01
CBWD3-205ENST00000469687 MYLKQ15746 1914 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 B2RBV5 119 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 MGEA5O60502 916 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 POMCP01189 267 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 IGHA2P01877 340 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PROCP04070 461 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 RGS2P41220 211 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SLC1A6P48664 564 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 CCNG1P51959 295 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PGGT1BP53609 377 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 AIF1P55008 147 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 HSP90AA5PQ58FG0 334 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 ARHGAP36Q6ZRI8 547 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 MAVSQ7Z434 540 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 STRA8Q7Z7C7 330 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 TNS4Q8IZW8 715 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 RBM15BQ8NDT2 890 aaKnown RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SMC1BQ8NDV3 1235 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 HDAC11Q96DB2 347 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SORT1Q99523 831 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 CPNE1Q99829 537 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SENP6Q9GZR1 1112 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 GBA3Q9H227 469 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 CASS4Q9NQ75 786 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 CHRAC1Q9NRG0 131 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 Q9Y3F1 56 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PTPRDP23468 1912 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 F8W810 466 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 KRT36O76013 467 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 FAM163BP0C2L3 166 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PTDSS1P48651 473 aaKnown RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 CXCR3P49682 368 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 CLNS1AP54105 237 aaKnown RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 IRF9Q00978 393 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 GALNT2Q10471 571 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 STXBP5Q5T5C0 1151 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 FSTL4Q6MZW2 842 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 C17orf99Q6UX52 265 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PDZD4Q76G19 769 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 TMEM135Q86UB9 458 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SCAMP5Q8TAC9 235 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 ZSCAN18Q8TBC5 510 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PIWIL2Q8TC59 973 aaKnown RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 USP33Q8TEY7 942 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 ZNF419Q96HQ0 510 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 RBBP8Q99708 897 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 APBA2Q99767 749 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 OXCT2Q9BYC2 517 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 LRRC40Q9H9A6 602 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PNPOQ9NVS9 261 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.01□□□□□ -0.01
CBWD3-205ENST00000469687 DCDC2Q9UHG0 476 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 PTCH2Q9Y6C5 1203 aa15.01□□□□□ -0.01
CBWD3-205ENST00000469687 NLRC5Q86WI3 1866 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 CAPN15O75808 1086 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 B3GAT3O94766 335 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 SRGAP2BP0DMP2 458 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 AKR1A1P14550 325 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 HCAR3P49019 387 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 PGFP49763 221 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ERFP50548 548 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 SESN3P58005 492 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 NAB1Q13506 487 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 TUBB3Q13509 450 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ARL13BQ3SXY8 428 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ANKRD20A4Q4UJ75 823 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 OTOP3Q7RTS5 596 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 LRRTM3Q86VH5 581 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ATP2A3Q93084 1043 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 CLPTM1LQ96KA5 538 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 CXorf56Q9H5V9 222 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 RRAGCQ9HB90 399 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 CSNK1G1Q9HCP0 422 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 BFARQ9NZS9 450 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 COPG2Q9UBF2 871 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15□□□□□ -0.01
CBWD3-205ENST00000469687 USP1O94782 785 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 JCHAINP01591 159 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ITGB1P05556 798 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 ITGA9Q13797 1035 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 GRTP1Q5TC63 336 aa15□□□□□ -0.01
CBWD3-205ENST00000469687 VWA5B1Q5TIE3 1220 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms