RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CNTN1Q12860 1018 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 FOXD4Q12950 439 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-213ENST00000469300 ZNF470Q6ECI4 717 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
LIMS2-213ENST00000469300 SPATA17Q96L03 361 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 ASB2Q96Q27 587 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 WARS2Q9UGM6 360 aaKnown RBP15.36■□□□□ 0.05
LIMS2-213ENST00000469300 PCYOX1Q9UHG3 505 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 VPS51Q9UID3 782 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 NAALADL1Q9UQQ1 740 aa15.36■□□□□ 0.05
LIMS2-213ENST00000469300 DYRK3O43781 588 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 CILPO75339 1184 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 GJB6O95452 261 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 C4BPAP04003 597 aaKnown RBP15.35■□□□□ 0.05
LIMS2-213ENST00000469300 MMP8P22894 467 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 XRCC4Q13426 336 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 DDX39BQ13838 428 aaKnown RBP15.35■□□□□ 0.05
LIMS2-213ENST00000469300 PPP1R26Q5T8A7 1209 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-213ENST00000469300 RFX8Q6ZV50 586 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 BSNDQ8WZ55 320 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 NFKBIZQ9BYH8 718 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ELOVL6Q9H5J4 265 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 RNF19AQ9NV58 838 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ETNK2Q9NVF9 386 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 QSOX1O00391 747 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 SERPINB3P29508 390 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 MBTD1Q05BQ5 628 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 LRRC74AQ0VAA2 488 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 PHKG1Q16816 387 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 PPP1R13LQ8WUF5 828 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 KAT2BQ92831 832 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 THAP11Q96EK4 314 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 OSGEPL1Q9H4B0 414 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 EFCAB1Q9HAE3 211 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ZNF556Q9HAH1 456 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ITGAVP06756 1048 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 DRG2P55039 364 aaKnown RBP15.35■□□□□ 0.05
LIMS2-213ENST00000469300 MRPS15P82914 257 aaKnown RBP15.35■□□□□ 0.05
LIMS2-213ENST00000469300 PRKAA1Q13131 559 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 TMC3Q7Z5M5 1100 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 IFNEQ86WN2 208 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 NPAS4Q8IUM7 802 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 FNIP1Q8TF40 1166 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 DNAJC9Q8WXX5 260 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 CEP19Q96LK0 163 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 SH3GL1Q99961 368 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 LRRC19Q9H756 370 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ATP13A3Q9H7F0 1226 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
LIMS2-213ENST00000469300 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-213ENST00000469300 EPHB6O15197 1021 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 LGR5O75473 907 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 FKBP9O95302 570 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ERFP50548 548 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 NEPROQ6NW34 567 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 FKBP9P1Q75LS8 142 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ECSITQ9BQ95 431 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 CEP41Q9BYV8 373 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 CHST7Q9NS84 486 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 FBXL21Q9UKT6 434 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-213ENST00000469300 WDR27A2RRH5 827 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 PDE2AO00408 941 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-213ENST00000469300 TPH1P17752 444 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 CRHR2Q13324 411 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ACOX1Q15067 660 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 MYCBPAPQ8TBZ2 947 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 MAGEC3Q8TD91 643 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 SLC28A3Q9HAS3 691 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 TBC1D14Q9P2M4 693 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 PDZK1P1A8MUH7 402 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 TYMPP19971 482 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 HALP42357 657 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 GLRBP48167 497 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 PRKCZQ05513 592 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 TPGS1Q6ZTW0 290 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 MLPHQ9BV36 600 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-213ENST00000469300 SRRDQ9UH36 339 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 POLG2Q9UHN1 485 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 CCDC159P0C7I6 412 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ATP6V1E1P36543 226 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 NAA20P61599 178 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 SULT2A1Q06520 285 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 MAD2L1Q13257 205 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ANKS6Q68DC2 871 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 C16orf59Q7L2K0 433 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 MDM1Q8TC05 714 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ACBD6Q9BR61 282 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 MRPL45Q9BRJ2 306 aaKnown RBP15.34■□□□□ 0.05
LIMS2-213ENST00000469300 TSEN34Q9BSV6 310 aaKnown RBP15.34■□□□□ 0.05
LIMS2-213ENST00000469300 THTPAQ9BU02 230 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 FZD8Q9H461 694 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 CD248Q9HCU0 757 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 ACP6Q9NPH0 428 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
LIMS2-213ENST00000469300 KANSL1LA0AUZ9 987 aa15.33■□□□□ 0.05
LIMS2-213ENST00000469300 LIASO43766 372 aa15.33■□□□□ 0.05
LIMS2-213ENST00000469300 TRIM13O60858 407 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms