RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 SLC44A2Q8IWA5 706 aaPredicted RBP3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 FTSJ3Q8IY81 847 aaKnown RBP3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 OTUD7AQ8TE49 926 aaPredicted RBP3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 WIPF2Q8TF74 440 aaPredicted RBP3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 CPT1BQ92523 772 aa3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 PYM1Q9BRP8 204 aaKnown RBP3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 FBXO28Q9NVF7 368 aa3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 C9orf78Q9NZ63 289 aaPredicted RBP3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 GPR52Q9Y2T5 361 aa3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 SCN5AQ14524 2016 aa3.68□□□□□ -1.82
SOX2-OT-204ENST00000469278 C2CD4BA6NLJ0 364 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 A8MVJ9 347 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 LDB3O75112 727 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 RXRAP19793 462 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 TCEA1P23193 301 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 HOXA11P31270 313 aaPredicted RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 MCM5P33992 734 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 POLD2P49005 469 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 EGR4Q05215 589 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 SEMA3BQ13214 749 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 GRM4Q14833 912 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 FAM110CQ1W6H9 321 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 TMEM196Q5HYL7 178 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 ANKRD40Q6AI12 368 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 GRHL2Q6ISB3 625 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 MOGAT3Q86VF5 341 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 OR6Y1Q8NGX8 325 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 RSC1A1Q92681 617 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 TRMT61AQ96FX7 289 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 REXO5Q96IC2 774 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 HIC2Q96JB3 615 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 UBXN10Q96LJ8 280 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 UBA5Q9GZZ9 404 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 PABPC3Q9H361 631 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 CCDC134Q9H6E4 229 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 PRDM8Q9NQV8 689 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 GAR1Q9NY12 217 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 WNT16Q9UBV4 365 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 SRP68Q9UHB9 627 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 ANAPC4Q9UJX5 808 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 BAG5Q9UL15 447 aa3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 C19orf53Q9UNZ5 99 aaPredicted RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 LRRFIP2Q9Y608 721 aaKnown RBP3.67□□□□□ -1.82
SOX2-OT-204ENST00000469278 GXYLT2A0PJZ3 443 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 RRN3P2A6NIE6 340 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 HMGB1P1B2RPK0 211 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 ZNF814B7Z6K7 855 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 KIF28PB7ZC32 967 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 H0Y3Z8 333 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 CLIC1O00299 241 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 TMPRSS11DO60235 418 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 TAF5LO75529 589 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 RPP40O75818 363 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 LARGE1O95461 756 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 CER1O95813 267 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 SLC3A2P08195 630 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 ACAA1P09110 424 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 ATF7P17544 494 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 XBP1P17861 261 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 CD53P19397 219 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 CST5P28325 142 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 SERPINA4P29622 427 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 ADD2P35612 726 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 PBX1P40424 430 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 PRKAA2P54646 552 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 TXNL4AP83876 142 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 SF3A3Q12874 501 aaKnown RBP eCLIP3.66□□□□□ -1.825e-10■□□□□ 9.3
SOX2-OT-204ENST00000469278 CUL4BQ13620 913 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 MFSD13AQ14CX5 517 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 SLC4A8Q2Y0W8 1093 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 AASDHQ4L235 1098 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 EARS2Q5JPH6 523 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 CCDC144NLQ6NUI1 221 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 MSANTD2Q6P1R3 559 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 FAM57BQ71RH2 274 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 TRAPPC11Q7Z392 1133 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 SUGP1Q8IWZ8 645 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 SCAMP5Q8TAC9 235 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 ELP5Q8TE02 316 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 OIT3Q8WWZ8 545 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 THAP4Q8WY91 577 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 USP13Q92995 863 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 EVI5LQ96CN4 794 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 FAR2Q96K12 515 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 CINPQ9BW66 212 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 USP29Q9HBJ7 922 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 LIN7CQ9NUP9 197 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 NDUFAF4Q9P032 175 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 MGAT4CQ9UBM8 478 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 PCDHA12Q9UN75 941 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 LZTS1Q9Y250 596 aa3.66□□□□□ -1.82
SOX2-OT-204ENST00000469278 FAM90A18PA6NE21 464 aa3.65□□□□□ -1.83
SOX2-OT-204ENST00000469278 FAM90A16PA6NEW6 464 aa3.65□□□□□ -1.83
SOX2-OT-204ENST00000469278 FAM90A9PA6NNJ1 464 aa3.65□□□□□ -1.83
SOX2-OT-204ENST00000469278 FAM90A5PA8MXJ8 464 aa3.65□□□□□ -1.83
SOX2-OT-204ENST00000469278 F8W810 466 aa3.65□□□□□ -1.83
SOX2-OT-204ENST00000469278 NCAM2O15394 837 aa3.65□□□□□ -1.83
SOX2-OT-204ENST00000469278 TLX3O43711 291 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms