RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MAK16Q9BXY0 300 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 SIK2Q9H0K1 926 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 TBC1D14Q9P2M4 693 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 EPS15L1Q9UBC2 864 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 FEZ2Q9UHY8 353 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 LSM7Q9UK45 103 aaKnown RBP8.39□□□□□ -1.07
NPHP3-204ENST00000469232 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 VANGL2Q9ULK5 521 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 MFHAS1Q9Y4C4 1052 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 SZT2Q5T011 3432 aa8.39□□□□□ -1.07
NPHP3-204ENST00000469232 A0A1B0GVM2 712 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 TARSL2A2RTX5 802 aaKnown RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 TCAF2A6NFQ2 919 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 ANHXE9PGG2 379 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 F5H5T6 163 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 SLC9A3R1O14745 358 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CREB3O43889 395 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 MFSD11O43934 449 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CLDN11O75508 207 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CNTN5O94779 1100 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 MOCS2O96007 188 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 HMBSP08397 361 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 SERPINB6P35237 376 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 PPIDQ08752 370 aaKnown RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 HABP4Q5JVS0 413 aaKnown RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 KAZNQ674X7 775 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 TMCO3Q6UWJ1 677 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 KIAA0907Q7Z7F0 614 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 SETD3Q86TU7 594 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 BBS7Q8IWZ6 715 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 ALLCQ8N6M5 410 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 EIF1ADQ8N9N8 165 aaKnown RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 HJURPQ8NCD3 748 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 C1orf54Q8WWF1 131 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 P3H4Q92791 437 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 MAGOHBQ96A72 148 aaKnown RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 MYADMQ96S97 322 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 FAM83CQ9BQN1 747 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 DDX47Q9H0S4 455 aaKnown RBP8.38□□□□□ -1.07
NPHP3-204ENST00000469232 NDFIP2Q9NV92 336 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CLDND1Q9NY35 253 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 STIM2Q9P246 746 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CD207Q9UJ71 328 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 CDH22Q9UJ99 828 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 FBXO10Q9UK96 956 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 OR51B4Q9Y5P0 310 aa8.38□□□□□ -1.07
NPHP3-204ENST00000469232 ILVBLA1L0T0 632 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ECI2O75521 394 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 PEX11BO96011 259 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ADH1BP00325 375 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 RBP3P10745 1247 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 LAMP2P13473 410 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 MX2P20592 715 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 IVDP26440 423 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 STIP1P31948 543 aaKnown RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 SGSHP51688 502 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 RPS24P62847 133 aaKnown RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 LMNB2Q03252 620 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 C2orf54Q08AI8 447 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 SMAD4Q13485 552 aaKnown RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 BYSLQ13895 437 aaKnown RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 CBX2Q14781 532 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 PDK1Q15118 436 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 LLGL1Q15334 1064 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 PARP15Q460N3 678 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 SLC45A4Q5BKX6 768 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 RABGAP1LQ5R372 815 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ZFYVE27Q5T4F4 411 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 FYB2Q5VWT5 728 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 CXorf57Q6NSI4 855 aaKnown RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 CCDC137Q6PK04 289 aaKnown RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 MAATS1Q7Z4T9 603 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ADGRG2Q8IZP9 1017 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 LGI2Q8N0V4 545 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 OSCP1Q8WVF1 389 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ING5Q8WYH8 240 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ATG4AQ8WYN0 398 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 MAML1Q92585 1016 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ELSPBP1Q96BH3 223 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ALG14Q96F25 216 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 KRT12Q99456 494 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 ACE2Q9BYF1 805 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 MAGEH1Q9H213 219 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 POMKQ9H5K3 350 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 MPP6Q9NZW5 540 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 SAE1Q9UBE0 346 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 SH3BP1Q9Y3L3 701 aa8.37□□□□□ -1.07
NPHP3-204ENST00000469232 USP15Q9Y4E8 981 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-204ENST00000469232 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 C5orf60A6NFR6 353 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MCF2LO15068 1137 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TP73O15350 636 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 HOXC11O43248 304 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms