RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 LSP1P33241 339 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 MSH2P43246 934 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 IRAK1P51617 712 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 EPHB3P54753 998 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 FPGSQ05932 587 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 TEX44Q53QW1 395 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 MS4A13Q5J8X5 152 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 HECTD3Q5T447 861 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 PIK3R6Q5UE93 754 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 AFMIDQ63HM1 303 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 NAPEPLDQ6IQ20 393 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 FAM117BQ6P1L5 589 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 CAPN12Q6ZSI9 719 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 C3orf62Q6ZUJ4 267 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF534Q76KX8 674 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 LINC00523Q86TU6 105 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 CAND1Q86VP6 1230 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 CHSY1Q86X52 802 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 MIB1Q86YT6 1006 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 TCEAL8Q8IYN2 117 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 C7orf61Q8IZ16 206 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 UMODL1-AS1Q8N2C9 162 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 FIBCD1Q8N539 461 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 CCDC33Q8N5R6 958 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 GSDMBQ8TAX9 411 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 GPR152Q8TDT2 470 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 FBF1Q8TES7 1133 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 GIPC2Q8TF65 315 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 NSMCE1Q8WV22 266 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 STAMBPL1Q96FJ0 436 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 MYRFLQ96LU7 910 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF512Q96ME7 567 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 XPO6Q96QU8 1125 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 PAFAH2Q99487 392 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 EBNA1BP2Q99848 306 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 CLSTN3Q9BQT9 956 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 LRRC40Q9H9A6 602 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 CYP4F11Q9HBI6 524 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SSU72Q9NP77 194 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 INTS9Q9NV88 658 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 NKIRAS1Q9NYS0 192 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SAMD15Q9P1V8 674 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 RABGEF1Q9UJ41 708 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 NUDT5Q9UKK9 219 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SMG5Q9UPR3 1016 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 AAR2Q9Y312 384 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SNX10Q9Y5X0 201 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 TCRBV9S1A1TA0A576 114 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 SDR42E2A6NKP2 422 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 F5H5T6 163 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 KCNK1O00180 336 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ADAM12O43184 909 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ANXA9O76027 345 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 CHN1P15882 459 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 PGAM1P18669 254 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 NFKB1P19838 968 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 IFNAR2P48551 515 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 SLC11A2P49281 568 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 HARS2P49590 506 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 PGFP49763 221 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 GEMP55040 296 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 HTRA4P83105 476 aaPredicted RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 GUCY1A3Q02108 690 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 PARP15Q460N3 678 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 RABGAP1LQ5R372 815 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 HP1BP3Q5SSJ5 553 aaPredicted RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 LGSNQ5TDP6 509 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 RASIP1Q5U651 963 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ARMC3Q5W041 872 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 STEAP4Q687X5 459 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF449Q6P9G9 518 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ADGRD1Q6QNK2 874 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 TRABD2AQ86V40 505 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 EXOC3L1Q86VI1 746 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 NLRP14Q86W24 1093 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ARHGAP12Q8IWW6 846 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 SRRM1Q8IYB3 904 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 PDCD7Q8N8D1 485 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 CDKL2Q92772 493 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 AZIN2Q96A70 460 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ALKBH8Q96BT7 664 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 CELF6Q96J87 481 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 TEKT5Q96M29 485 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 SMC6Q96SB8 1091 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 DDX50Q9BQ39 737 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 WDR83Q9BRX9 315 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 DHRS4Q9BTZ2 278 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 NSRP1Q9H0G5 558 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ZBP1Q9H171 429 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 EPN3Q9H201 632 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 MTIF3Q9H2K0 278 aaKnown RBP9.56□□□□□ -0.88
SMC1A-205ENST00000469129 CCSER2Q9H7U1 834 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 SP110Q9HB58 689 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 CTNNAL1Q9UBT7 734 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 TBK1Q9UHD2 729 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 VANGL2Q9ULK5 521 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 RWDD3Q9Y3V2 267 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 TTLL3Q9Y4R7 772 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ASB3Q9Y575 518 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms