RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 OSBPL8Q9BZF1 889 aa11.58□□□□□ -0.56
MSH5-214ENST00000468602 NOL6Q9H6R4 1146 aaKnown RBP11.58□□□□□ -0.56
MSH5-214ENST00000468602 KIAA1522Q9P206 1035 aaPredicted RBP11.58□□□□□ -0.56
MSH5-214ENST00000468602 PACSIN2Q9UNF0 486 aaPredicted RBP11.58□□□□□ -0.56
MSH5-214ENST00000468602 NUP205Q92621 2012 aa11.58□□□□□ -0.56
MSH5-214ENST00000468602 TICRRQ7Z2Z1 1910 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.57□□□□□ -0.56
MSH5-214ENST00000468602 MAN2B1O00754 1011 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 NPC1O15118 1278 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TIMM44O43615 452 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 CREB3O43889 395 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TBL1XO60907 577 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 SRGAP2O75044 1071 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TULP3O75386 442 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TJP3O95049 919 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
MSH5-214ENST00000468602 HLA-FP30511 346 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 IRAK1P51617 712 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 STARD6P59095 220 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 SULT2A1Q06520 285 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 SLC20A2Q08357 652 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ZNF177Q13360 481 aaPredicted RBP11.57□□□□□ -0.56
MSH5-214ENST00000468602 XRCC4Q13426 336 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TMEM196Q5HYL7 178 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TMCO4Q5TGY1 634 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ZNF572Q7Z3I7 529 aaPredicted RBP11.57□□□□□ -0.56
MSH5-214ENST00000468602 SLC13A5Q86YT5 568 aaPredicted RBP11.57□□□□□ -0.56
MSH5-214ENST00000468602 RNF135Q8IUD6 432 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 MFN1Q8IWA4 741 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ARHGAP12Q8IWW6 846 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ZNF687Q8N1G0 1237 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 C17orf53Q8N3J3 647 aaPredicted RBP11.57□□□□□ -0.56
MSH5-214ENST00000468602 DDI1Q8WTU0 396 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ZFYVE19Q96K21 471 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 CALN1Q9BXU9 219 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 GTSE1Q9NYZ3 720 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 HCN4Q9Y3Q4 1203 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 SNX10Q9Y5X0 201 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 MUC6Q6W4X9 2439 aa11.57□□□□□ -0.56
MSH5-214ENST00000468602 ZSCAN5CA6NGD5 496 aaPredicted RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 ESPNB1AK53 854 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 NEDD8-MDP1E9PL57 170 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 KCNK3O14649 394 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 APOL1O14791 398 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 ZMPSTE24O75844 475 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 ASGR2P07307 311 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 MX2P20592 715 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 AMPD1P23109 780 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 OR1E1P30953 314 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 CTHP32929 405 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 GRIA2P42262 883 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 TNFRSF4P43489 277 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 GNA12Q03113 381 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 GALNT2Q10471 571 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 ENPP2Q13822 863 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 SLC44A4Q53GD3 710 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 SEL1L2Q5TEA6 688 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 TPGS1Q6ZTW0 290 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 CREG2Q8IUH2 290 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 AHI1Q8N157 1196 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 DCAF4L2Q8NA75 395 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 CCDC26Q8TAB7 109 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 CASKIN2Q8WXE0 1202 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 ARHGEF2Q92974 986 aaKnown RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 RNF25Q96BH1 459 aaPredicted RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 HDAC11Q96DB2 347 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 NAP1L3Q99457 506 aaPredicted RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 HERPUD2Q9BSE4 406 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 FEM1AQ9BSK4 669 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 C1QTNF1Q9BXJ1 281 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 MAK16Q9BXY0 300 aaKnown RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 HOMER3Q9NSC5 361 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 NDFIP2Q9NV92 336 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 ETNK2Q9NVF9 386 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 DTLQ9NZJ0 730 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 DEC1Q9P2X7 70 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 CLEC4EQ9ULY5 219 aa11.56□□□□□ -0.56
MSH5-214ENST00000468602 TCF20Q9UGU0 1960 aaKnown RBP11.56□□□□□ -0.56
MSH5-214ENST00000468602 HACD1B0YJ81 288 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 PI4K2BG5E9Z4 385 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 ENC1O14682 589 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 DAPK3O43293 454 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 TSPAN3O60637 253 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 CST8O60676 142 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 RAMP2O60895 175 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 ASLP04424 464 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 PABPC1P11940 636 aaKnown RBP11.55□□□□□ -0.56
MSH5-214ENST00000468602 HNRNPLP14866 589 aaKnown RBP eCLIP11.55□□□□□ -0.566e-15■■■□□ 16.8
MSH5-214ENST00000468602 DRD1P21728 446 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 CASQ1P31415 396 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 GGCXP38435 758 aa11.55□□□□□ -0.56
MSH5-214ENST00000468602 DGKGP49619 791 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms