RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PLA2G4CQ9UP65 541 aa14.94□□□□□ -0.02
COL27A1-203ENST00000468565 GON4LQ3T8J9 2241 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 SYNJ2BP-COX16A0A087WUM0 186 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 M0QYT0 321 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 MAP3K13O43283 966 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 SYNCRIPO60506 623 aaKnown RBP14.93□□□□□ -0.02
COL27A1-203ENST00000468565 ATP5BP06576 529 aaKnown RBP14.93□□□□□ -0.02
COL27A1-203ENST00000468565 CHRNB2P17787 502 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 POLR2EP19388 210 aaKnown RBP14.93□□□□□ -0.02
COL27A1-203ENST00000468565 LMAN2Q12907 356 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 CDH18Q13634 790 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 FAM102AQ5T9C2 384 aaPredicted RBP14.93□□□□□ -0.02
COL27A1-203ENST00000468565 OTUD1Q5VV17 481 aaPredicted RBP14.93□□□□□ -0.02
COL27A1-203ENST00000468565 NAA35Q5VZE5 725 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 SERPINA13PQ6UXR4 307 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 ARCQ7LC44 396 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 KRT222Q8N1A0 295 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 CARNMT1Q8N4J0 409 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 TTC17Q96AE7 1141 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 TMEM245Q9H330 911 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 COX16Q9P0S2 106 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 MYO6Q9UM54 1294 aa14.93□□□□□ -0.02
COL27A1-203ENST00000468565 IGHV1OR15-9A0A0B4J2B8 117 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 EPHX1P07099 455 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 DLDP09622 509 aaKnown RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 DPP6P42658 865 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 VAV2P52735 878 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 DMTNQ08495 405 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 NME3Q13232 169 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 PTPRNQ16849 979 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 FNDC3BQ53EP0 1204 aaKnown RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 TXLNBQ8N3L3 684 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 FRMD1Q8N878 549 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 C12orf50Q8NA57 414 aaPredicted RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CYB5D2Q8WUJ1 264 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CPA5Q8WXQ8 436 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 DEF6Q9H4E7 631 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 PRDM16Q9HAZ2 1276 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 ZNF446Q9NWS9 450 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 TRIM10Q9UDY6 481 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CDV3Q9UKY7 258 aaKnown RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 F9P00740 461 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 ASLP04424 464 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 C7P10643 843 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 MMP8P22894 467 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 DHPSP49366 369 aaPredicted RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CXCR3P49682 368 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 SULT1E1P49888 294 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 KIF5AQ12840 1032 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CAMK2GQ13555 558 aaPredicted RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CCDC6Q16204 474 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 SLC25A52Q3SY17 297 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 BRMS1LQ5PSV4 323 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 RABGAP1LQ5R372 815 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 KIAA1324Q6UXG2 1013 aaKnown RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 ERMP1Q7Z2K6 904 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 CYP2U1Q7Z449 544 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 MKRN2Q9H000 416 aaKnown RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 FBRSQ9HAH7 460 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 PIGVQ9NUD9 493 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 KIAA1522Q9P206 1035 aaPredicted RBP14.92□□□□□ -0.02
COL27A1-203ENST00000468565 TMEM59LQ9UK28 342 aa14.92□□□□□ -0.02
COL27A1-203ENST00000468565 DNAH14Q0VDD8 3507 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 CTAGE15A4D2H0 777 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 H0Y626 953 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 ATP8B1O43520 1251 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 CTAGE8P0CG41 777 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 UNGP13051 313 aaPredicted RBP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 COPAP53621 1224 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 LIMK1P53667 647 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 RNASE9P60153 205 aaKnown RBP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 SF3A2Q15428 464 aaKnown RBP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 AASDHQ4L235 1098 aaPredicted RBP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 SND1Q7KZF4 910 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 CTAGE6Q86UF2 777 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 CTAGE4Q8IX94 777 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 KDM1BQ8NB78 822 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 ERLEC1Q96DZ1 483 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 RTKNQ9BST9 563 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 ADAM33Q9BZ11 813 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 SLC6A17Q9H1V8 727 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 WDCPQ9H6R7 721 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 ARHGEF38Q9NXL2 777 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 FAM53CQ9NYF3 392 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 USP36Q9P275 1121 aaKnown RBP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 INTS6Q9UL03 887 aaKnown RBP14.91□□□□□ -0.02
COL27A1-203ENST00000468565 CYP8B1Q9UNU6 501 aa14.91□□□□□ -0.02
COL27A1-203ENST00000468565 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 A0A1B0GVM2 712 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 TCAF2A6NFQ2 919 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 GOLGA8SH3BPF8 625 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 PAGE1O75459 146 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 MOCS3O95396 460 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 HLA-EP13747 358 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 FLT3P36888 993 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 CSKP41240 450 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms