RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 OR2T34Q8NGX1 318 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 PTPRN2Q92932 1015 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 CPXM1Q96SM3 734 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 CCDC86Q9H6F5 360 aaKnown RBP21.74■■□□□ 1.07
COL9A3-207ENST00000467819 EBF2Q9HAK2 575 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 AASDHPPTQ9NRN7 309 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 DDIT4Q9NX09 232 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 ADAMTS1Q9UHI8 967 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 FZD4Q9ULV1 537 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 NBEAQ8NFP9 2946 aa21.74■■□□□ 1.07
COL9A3-207ENST00000467819 ATRXP46100 2492 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 VILLO15195 856 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 PCDHGA12O60330 932 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 GRAP2O75791 330 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 ADH1BP00325 375 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 IL1BP01584 269 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 VAV1P15498 845 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 ABCB4P21439 1286 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 MZF1P28698 734 aaPredicted RBP21.73■■□□□ 1.07
COL9A3-207ENST00000467819 NNMTP40261 264 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 RABGAP1LQ5R372 815 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 PRAMEF14Q5SWL7 426 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 GBP6Q6ZN66 633 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 SND1Q7KZF4 910 aaKnown RBP eCLIP21.73■■□□□ 1.075e-20■■■□□ 15.8
COL9A3-207ENST00000467819 MARCH9Q86YJ5 346 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 MDM1Q8TC05 714 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 FAM81BQ96LP2 452 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 PRMT1Q99873 361 aaKnown RBP21.73■■□□□ 1.07
COL9A3-207ENST00000467819 APEX2Q9UBZ4 518 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 RWDD2AQ9UIY3 292 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 CELSR3Q9NYQ7 3312 aa21.73■■□□□ 1.07
COL9A3-207ENST00000467819 A0A1B0GVM2 712 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 TCAF2A6NFQ2 919 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 TNFSF14O43557 240 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 DKK1O94907 266 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 WNT1P04628 370 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 CENPCQ03188 943 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 EIF4EBP2Q13542 120 aaPredicted RBP21.72■■□□□ 1.07
COL9A3-207ENST00000467819 SLC12A1Q13621 1099 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 KCNJ12Q14500 433 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 TMPRSS7Q7RTY8 843 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 WDTC1Q8N5D0 677 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 OR14C36Q8NHC7 312 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 PPP1R13BQ96KQ4 1090 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 SLC2A13Q96QE2 648 aa21.72■■□□□ 1.07
COL9A3-207ENST00000467819 COL5A1P20908 1838 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-207ENST00000467819 SLC2A3P11169 496 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 GOT1P17174 413 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 C5AR1P21730 350 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 CCR1P32246 355 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 GGCXP38435 758 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 ADPRHP54922 357 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 ELAVL3Q14576 367 aaKnown RBP21.71■■□□□ 1.07
COL9A3-207ENST00000467819 CAMK4Q16566 473 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 EXOC3L4Q17RC7 722 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 INAVAQ3KP66 663 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 EFHC1Q5JVL4 640 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 TTC39BQ5VTQ0 682 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-207ENST00000467819 OR6B2Q6IFH4 312 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 FBXL22Q6P050 247 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 LRSAM1Q6UWE0 723 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 FAM183BPQ6ZVS7 135 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 GATAD2AQ86YP4 633 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 C1orf131Q8NDD1 294 aaKnown RBP21.71■■□□□ 1.07
COL9A3-207ENST00000467819 SHC3Q92529 594 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 SKA1Q96BD8 255 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 RPRD1AQ96P16 312 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-207ENST00000467819 KIAA1468Q9P260 1216 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 FTSJ1Q9UET6 329 aa21.71■■□□□ 1.07
COL9A3-207ENST00000467819 A0A1B0GTQ1 180 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 PLK4O00444 970 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 WNT9AO14904 365 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 DFNA5O60443 496 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 HSF2BPO75031 334 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 GLI1P08151 1106 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 HOXB3P14651 431 aaPredicted RBP21.7■■□□□ 1.06
COL9A3-207ENST00000467819 CD38P28907 300 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 CCR5P51681 352 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 SULT2A1Q06520 285 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 NME3Q13232 169 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 CXorf57Q6NSI4 855 aaKnown RBP21.7■■□□□ 1.06
COL9A3-207ENST00000467819 ELF4Q99607 663 aaPredicted RBP21.7■■□□□ 1.06
COL9A3-207ENST00000467819 ASNSD1Q9NWL6 643 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 AJAP1Q9UKB5 411 aaPredicted RBP21.7■■□□□ 1.06
COL9A3-207ENST00000467819 VANGL2Q9ULK5 521 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 PCDHGC3Q9UN70 934 aa21.7■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3DA0A087WVF3 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3IA0A087WXS9 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3EA0A087X179 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3KA0A087X1G2 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3FA6NER0 549 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3LB9A6J9 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3HP0C7X1 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 PON1P27169 355 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 DRD3P35462 400 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 MTIF2P46199 727 aaKnown RBP21.69■■□□□ 1.06
COL9A3-207ENST00000467819 IRAK1P51617 712 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 METAP1P53582 386 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 PPP2CBP62714 309 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 PPP2CAP67775 309 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms