RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 FOXL2P58012 376 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 SHC2P98077 582 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 NUCB1Q02818 461 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 ICA1Q05084 483 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 PTK2BQ14289 1009 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 DLGAP5Q15398 846 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 CDC37Q16543 378 aaPredicted RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 ALDH1L2Q3SY69 923 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 ZACNQ401N2 412 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TRIM60Q495X7 471 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 KIAA1755Q5JYT7 1200 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3GQ6DHY5 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3CQ6IPX1 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TMEM88Q6PEY1 159 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 COLCA1Q6ZS62 124 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3Q8IZP1 549 aaPredicted RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 MMP21Q8N119 569 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 PAQR4Q8N4S7 273 aaPredicted RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 C9orf106Q8NAJ2 232 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 HMGB4Q8WW32 186 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 CCT6BQ92526 530 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 RSC1A1Q92681 617 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 NLRP4Q96MN2 994 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 RTKNQ9BST9 563 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 MECRQ9BV79 373 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TMEM120AQ9BXJ8 343 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 SFXN1Q9H9B4 322 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.18□□□□□ -1.74
VPS50-209ENST00000467326 COG5Q9UP83 839 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 SLC12A4Q9UP95 1085 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 CNTN6Q9UQ52 1028 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 SQORQ9Y6N5 450 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 DGKBQ9Y6T7 804 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 KIR2DS5A0A0G2JLQ3 304 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 IGLV5-39A0A0G2JS06 123 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 hCG_1642624A0A1W2PR95 340 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 A0A1W2PRQ8 180 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 DPPA5A6NC42 116 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A10PA6NDY2 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A18PA6NE21 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A16PA6NEW6 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 MBD3L5A6NJ08 208 aaPredicted RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A9PA6NNJ1 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A5PA8MXJ8 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 B4DGG1 531 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 KIR2DS3K7RE56 304 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 RHODO00212 210 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 ACKR2O00590 384 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 TRIM38O00635 465 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 CYP3A4P08684 503 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A15PP0C7V4 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM90A14PP0C7W9 464 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 HOXB6P17509 224 aaKnown RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 TNFRSF1BP20333 461 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 ALDH7A1P49419 539 aaKnown RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 RBM6P78332 1123 aaKnown RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 GALNT1Q10472 559 aaPredicted RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 TOMM20Q15388 145 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 INPP5JQ15735 1006 aaPredicted RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 PFKFB4Q16877 469 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 ZNF569Q5MCW4 686 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 ATPAF1Q5TC12 328 aaPredicted RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 ISM2Q6H9L7 571 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 LIN54Q6MZP7 749 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 MZT2BQ6NZ67 158 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 CASC1Q6TDU7 716 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 RFX8Q6ZV50 586 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 PIM3Q86V86 326 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 EME1Q96AY2 570 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 CLMNQ96JQ2 1002 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 RMDN3Q96TC7 470 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 FAM234AQ9H0X4 552 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 AAMDCQ9H7C9 122 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 MLXIPQ9HAP2 919 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 DECR2Q9NUI1 292 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 LRFN1Q9P244 771 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 UTS2RQ9UKP6 389 aa4.17□□□□□ -1.74
VPS50-209ENST00000467326 COPG1Q9Y678 874 aaKnown RBP4.17□□□□□ -1.74
VPS50-209ENST00000467326 CYP3A7-CYP3A51PA0A087WV96 503 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 A0A1W2PPC1 479 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 ZNF814B7Z6K7 855 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 PRPF4O43172 522 aaKnown RBP eCLIP4.16□□□□□ -1.74
VPS50-209ENST00000467326 DHX16O60231 1041 aaKnown RBP4.16□□□□□ -1.74
VPS50-209ENST00000467326 ACTL6BO94805 426 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 NTN1O95631 604 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 NFATC1O95644 943 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 SYF2O95926 243 aaKnown RBP4.16□□□□□ -1.74
VPS50-209ENST00000467326 WNT1P04628 370 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 RPN1P04843 607 aaKnown RBP4.16□□□□□ -1.74
VPS50-209ENST00000467326 GYS1P13807 737 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 HSD3B1P14060 373 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 RRM1P23921 792 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 CYP3A7P24462 503 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 CIITAP33076 1130 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 LEXMQ3ZCV2 418 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 CCDC92Q53HC0 331 aaPredicted RBP4.16□□□□□ -1.74
VPS50-209ENST00000467326 C6orf10Q5SRN2 563 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms