RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 MYLK2Q9H1R3 596 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 IL21RQ9HBE5 538 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 AGO2Q9UKV8 859 aaKnown RBP4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 TMEM272A0A1B0GTI8 110 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 EFCAB8A8MWE9 144 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 ATG13O75143 517 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 ST6GAL1P15907 406 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 ADD2P35612 726 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 SLC37A1P57057 533 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 ZXDBP98169 803 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 EFR3AQ14156 821 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 P3H1Q32P28 736 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 SLC39A5Q6ZMH5 540 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 RASGRP2Q7LDG7 609 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 MORC4Q8TE76 937 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 CLEC4CQ8WTT0 213 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 THAP4Q8WY91 577 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 ATP2A3Q93084 1043 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 RILPL2Q969X0 211 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 REXO5Q96IC2 774 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 SENP7Q9BQF6 1050 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 TMEM204Q9BSN7 226 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 SLCO5A1Q9H2Y9 848 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 CCDC134Q9H6E4 229 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 PPCSQ9HAB8 311 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 MOV10Q9HCE1 1003 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 TXNRD2Q9NNW7 524 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 LIN7CQ9NUP9 197 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 ASNSD1Q9NWL6 643 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 RAB21Q9UL25 225 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 TRPC5Q9UL62 973 aaPredicted RBP4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 SLC12A4Q9UP95 1085 aa4.96□□□□□ -1.62
PRPF40A-205ENST00000467114 TRIP12Q14669 1992 aaPredicted RBP4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 SPTLC2O15270 562 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 PRPF4O43172 522 aaKnown RBP eCLIP4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 HOXB2P14652 356 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 ARL4CP56559 192 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 INPP5JQ15735 1006 aaPredicted RBP4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 TBRG1Q3YBR2 411 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 ZNF585BQ52M93 769 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 DGAT2L7PQ6IED9 249 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 WDR93Q6P2C0 686 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 B4GALNT4Q76KP1 1039 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 ANKS1BQ7Z6G8 1248 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 UEVLDQ8IX04 471 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 SPATA5Q8NB90 893 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 OR6Y1Q8NGX8 325 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 HMGB4Q8WW32 186 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 ZNF479Q96JC4 524 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 GPR78Q96P69 363 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 EIF3CQ99613 913 aaKnown RBP4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 ITM2CQ9NQX7 267 aa4.95□□□□□ -1.62
PRPF40A-205ENST00000467114 A0A1W2PPC1 479 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 C3orf70A6NLC5 250 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 CNTN5O94779 1100 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 ENO1P06733 434 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 NGFRP08138 427 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 SLC8A1P32418 973 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 POLD2P49005 469 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 VPS41P49754 854 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 CUL4BQ13620 913 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 CBFBQ13951 182 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 PRKG1Q13976 671 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 TMEM95Q3KNT9 176 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 ANKRD40Q6AI12 368 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 KIAA1324Q6UXG2 1013 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 CCDC117Q8IWD4 279 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 OR52N4Q8NGI2 321 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 ASB5Q8WWX0 329 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 TRAPPC9Q96Q05 1148 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 ZNF347Q96SE7 839 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 HERC2P3Q9BVR0 1158 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 VPS33BQ9H267 617 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 ELAC1Q9H777 363 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 SAYSD1Q9NPB0 183 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 SELENONQ9NZV5 590 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 NDUFAF4Q9P032 175 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 FEM1BQ9UK73 627 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 COPG1Q9Y678 874 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 ZNF335Q9H4Z2 1342 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 EVPLQ92817 2033 aa4.94□□□□□ -1.62
PRPF40A-205ENST00000467114 TCF20Q9UGU0 1960 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 TTC34A8MYJ7 566 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 UGDHO60701 494 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 ZC3H11AO75152 810 aaKnown RBP eCLIP4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 TFRCP02786 760 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 TK1P04183 234 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 WNT1P04628 370 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 TGFB3P10600 412 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 SERPINA4P29622 427 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 CDC25AP30304 524 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 ARRB2P32121 409 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 GRK5P34947 590 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 SHC2P98077 582 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 TIGD6Q17RP2 521 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 TTLL5Q6EMB2 1281 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 RRAGAQ7L523 313 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 MDGA2Q7Z553 956 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 RHPN2Q8IUC4 686 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 DCP1BQ8IZD4 617 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms