RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 C6orf118Q5T5N4 469 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 RNF43Q68DV7 783 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
UBA3-209ENST00000466763 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.28□□□□□ -0.12
UBA3-209ENST00000466763 KCTD15Q96SI1 283 aaPredicted RBP14.28□□□□□ -0.12
UBA3-209ENST00000466763 PRRX2Q99811 253 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 SPON2Q9BUD6 331 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 PPARGC1AQ9UBK2 798 aaKnown RBP14.28□□□□□ -0.12
UBA3-209ENST00000466763 DNAI1Q9UI46 699 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 VPS28Q9UK41 221 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 INTS6Q9UL03 887 aaKnown RBP14.28□□□□□ -0.12
UBA3-209ENST00000466763 MMP17Q9ULZ9 603 aa14.28□□□□□ -0.12
UBA3-209ENST00000466763 WASH3PC4AMC7 463 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 H0Y858 1186 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 BUB1O43683 1085 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 RARAP10276 462 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 HOXB2P14652 356 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 RHOQP17081 205 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 ARHGAP25P42331 645 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 ST8SIA6P61647 398 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 SLC12A1Q13621 1099 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 KRT81Q14533 505 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 ZNF234Q14588 700 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 PLEKHG6Q3KR16 790 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 MANEALQ5VSG8 457 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 HEATR6Q6AI08 1181 aaKnown RBP14.27□□□□□ -0.13
UBA3-209ENST00000466763 TXNRD3NBQ6F5E7 133 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 SYT13Q7L8C5 426 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 KIAA0907Q7Z7F0 614 aaPredicted RBP14.27□□□□□ -0.13
UBA3-209ENST00000466763 ZNF354CQ86Y25 554 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 CCDC112Q8NEF3 446 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 OR52K2Q8NGK3 314 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 KCNV2Q8TDN2 545 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 LMLNQ96KR4 655 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 HHIPQ96QV1 700 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 CATSPERBQ9H7T0 1116 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBA3-209ENST00000466763 THAP10Q9P2Z0 257 aaPredicted RBP14.27□□□□□ -0.13
UBA3-209ENST00000466763 HCN2Q9UL51 889 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.13
UBA3-209ENST00000466763 STON1Q9Y6Q2 735 aa14.27□□□□□ -0.13
UBA3-209ENST00000466763 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 ZBTB24O43167 697 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 MTA2O94776 668 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 ASLP04424 464 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 DLDP09622 509 aaKnown RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 HNRNPLP14866 589 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBA3-209ENST00000466763 GOT1P17174 413 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 COL9A1P20849 921 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 HOXC13P31276 330 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 ARL4AP40617 200 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 IL12RB1P42701 662 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 CTSOP43234 321 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 PXNP49023 591 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 VAV2P52735 878 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 CDH6P55285 790 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 HSF5Q4G112 596 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 SERPINA13PQ6UXR4 307 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 CYP4V2Q6ZWL3 525 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 SETD3Q86TU7 594 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 PSTKQ8IV42 348 aaKnown RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 LRRC8AQ8IWT6 810 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 TXLNBQ8N3L3 684 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 ZNF366Q8N895 744 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 TSTD1Q8NFU3 115 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 OR7D4Q8NG98 312 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 RPL10LQ96L21 214 aaKnown RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 FEM1AQ9BSK4 669 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 POLMQ9NP87 494 aaPredicted RBP14.26□□□□□ -0.13
UBA3-209ENST00000466763 TMEM248Q9NWD8 314 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 RAPGEFL1Q9UHV5 662 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 TBC1D30Q9Y2I9 924 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 HYOU1Q9Y4L1 999 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 RAD54BQ9Y620 910 aa14.26□□□□□ -0.13
UBA3-209ENST00000466763 A0A0D9SEW6 157 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 TCRBV21S2A2A0A5A6 115 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 H3BRJ5 948 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 SPOPO43791 374 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
UBA3-209ENST00000466763 ADAM23O75077 832 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 EPHX1P07099 455 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 HLA-EP13747 358 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 MAN1A1P33908 653 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 NNMTP40261 264 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 MAPKAPK2P49137 400 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 TAS2R40P59535 323 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 ECT2LQ008S8 904 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 SLC25A11Q02978 314 aaKnown RBP14.25□□□□□ -0.13
UBA3-209ENST00000466763 SULT2A1Q06520 285 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 KIF5AQ12840 1032 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 SEMA3BQ13214 749 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 STARD3Q14849 445 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 CRY1Q16526 586 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 ATP13A4Q4VNC1 1196 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 ODF2Q5BJF6 829 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 IL31Q6EBC2 164 aa14.25□□□□□ -0.13
UBA3-209ENST00000466763 TMEM92Q6UXU6 159 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms