RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SMAD3P84022 425 aaKnown RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 PABPC1LQ4VXU2 614 aaKnown RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 MS4A13Q5J8X5 152 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 NADSYN1Q6IA69 706 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 RWDD4Q6NW29 188 aaKnown RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 ZC3H18Q86VM9 953 aaKnown RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 APOL5Q9BWW9 433 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 OSBPL2Q9H1P3 480 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 ANAPC5Q9UJX4 755 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 H3BRJ5 948 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 APOC4-APOC2K7ER74 178 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 NDC80O14777 642 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 LINC01565O15544 149 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 MOSPD3O75425 235 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 APOC2P02655 101 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 SCTRP47872 440 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 GTF2A1P52655 376 aaPredicted RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 ITGA8P53708 1063 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 TRIP13Q15645 432 aaPredicted RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 RAP1GAP2Q684P5 730 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 KLHDC10Q6PID8 442 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 EXOC3L1Q86VI1 746 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 ZNF276Q8N554 614 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 GLIS1Q8NBF1 620 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 SHKBP1Q8TBC3 707 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 TMEM121Q9BTD3 319 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 KLF16Q9BXK1 252 aaPredicted RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 SLC46A2Q9BY10 475 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 ZNF576Q9H609 170 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 SLC40A1Q9NP59 571 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 KLC4Q9NSK0 619 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 MPP6Q9NZW5 540 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 VANGL2Q9ULK5 521 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 NEU2Q9Y3R4 380 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 GBF1Q92538 1859 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 STC2O76061 302 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 APOEP02649 317 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 MBL2P11226 248 aaPredicted RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 SLCO1A2P46721 670 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 PPP3CCP48454 512 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 TUBP50607 506 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 XRCC4Q13426 336 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 KCNC3Q14003 757 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 TFDP2Q14188 446 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 DENND1CQ8IV53 801 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 LRRC34Q8IZ02 419 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 SLC35B2Q8TB61 432 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 ARHGEF2Q92974 986 aaKnown RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 MRPL38Q96DV4 380 aaKnown RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 CDK5RAP1Q96SZ6 601 aaKnown RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 PRMT1Q99873 361 aaKnown RBP19.12■□□□□ 0.65
CAPN3-209ENST00000466222 NDFIP2Q9NV92 336 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 LGALS13Q9UHV8 139 aa19.12■□□□□ 0.65
CAPN3-209ENST00000466222 PLXNA3P51805 1871 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 E9PAM4 449 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 TRDMT1O14717 391 aaKnown RBP19.11■□□□□ 0.65
CAPN3-209ENST00000466222 DCLK1O15075 740 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 MFSD11O43934 449 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 ETS1P14921 441 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 PTPN2P17706 415 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 ADCY8P40145 1251 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 VSIG1Q86XK7 387 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 RIBC1Q8N443 379 aaPredicted RBP19.11■□□□□ 0.65
CAPN3-209ENST00000466222 NPWQ8N729 165 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 UHMK1Q8TAS1 419 aaKnown RBP19.11■□□□□ 0.65
CAPN3-209ENST00000466222 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 MRPS31Q92665 395 aaKnown RBP19.11■□□□□ 0.65
CAPN3-209ENST00000466222 BTN2A3PQ96KV6 586 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 CCDC77Q9BR77 488 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 PRKD2Q9BZL6 878 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 LMAN2LQ9H0V9 348 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 DTLQ9NZJ0 730 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 HBS1LQ9Y450 684 aaKnown RBP19.11■□□□□ 0.65
CAPN3-209ENST00000466222 ACTL7BQ9Y614 415 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 CPQQ9Y646 472 aa19.11■□□□□ 0.65
CAPN3-209ENST00000466222 ZNF487B1APH4 448 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ABHD2P08910 425 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ZSCAN5DPP0CG00 497 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 SLC2A3P11169 496 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 MNAT1P51948 309 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 GDF10P55107 478 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 EIF3EP60228 445 aaKnown RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 RING1Q06587 406 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 STAT4Q14765 748 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 TEAD2Q15562 447 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 OASLQ15646 514 aaKnown RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 MANEALQ5VSG8 457 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 RFWD3Q6PCD5 774 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CIR1Q86X95 450 aaPredicted RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ZNF683Q8IZ20 524 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 IGSF8Q969P0 613 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 EPAS1Q99814 870 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 PLCD4Q9BRC7 762 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 RCOR3Q9P2K3 495 aaPredicted RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ZNF148Q9UQR1 794 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ACSL3O95573 720 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 GLP2RO95838 553 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 OLFM2O95897 454 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CKMP06732 381 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms