RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 POU4F1Q01851 419 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 GRB10Q13322 594 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 ACAP2Q15057 778 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 KRT31Q15323 416 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 CCDC38Q502W7 563 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 PHF19Q5T6S3 580 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 AGAP9Q5VTM2 703 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 BHLHB9Q6PI77 547 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 SPATA31D4Q6ZUB0 917 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 DNAJB7Q7Z6W7 309 aaPredicted RBP9.65□□□□□ -0.86
SCAF11-205ENST00000465950 SYNPOQ8N3V7 929 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 TAB3Q8N5C8 712 aaPredicted RBP9.65□□□□□ -0.86
SCAF11-205ENST00000465950 DLG3Q92796 817 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 ZHX1-C8orf76Q96EF9 292 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 PACSIN2Q9UNF0 486 aaPredicted RBP9.65□□□□□ -0.86
SCAF11-205ENST00000465950 INSL5Q9Y5Q6 135 aa9.65□□□□□ -0.86
SCAF11-205ENST00000465950 ARF4P18085 180 aaPredicted RBP9.65□□□□□ -0.87
SCAF11-205ENST00000465950 TYK2P29597 1187 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 SPIDRQ14159 915 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 TRIP10Q15642 601 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 ZC2HC1CQ53FD0 456 aaPredicted RBP9.65□□□□□ -0.87
SCAF11-205ENST00000465950 RSPO2Q6UXX9 243 aaPredicted RBP9.65□□□□□ -0.87
SCAF11-205ENST00000465950 CACNA2D3Q8IZS8 1091 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 FBXL16Q8N461 479 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 FSTL5Q8N475 847 aaPredicted RBP9.65□□□□□ -0.87
SCAF11-205ENST00000465950 ART5Q96L15 291 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 SGK2Q9HBY8 427 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 PDE7BQ9NP56 450 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 PIAS3Q9Y6X2 628 aa9.65□□□□□ -0.87
SCAF11-205ENST00000465950 RAD51BO15315 384 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 B4GALT4O60513 344 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 DAB1O75553 588 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 GJB5O95377 273 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 MAGEA11P43364 429 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CACHD1Q5VU97 1274 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 RNF43Q68DV7 783 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 OTOAQ7RTW8 1153 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ELMO2Q96JJ3 720 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 TMEM209Q96SK2 561 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 FAM126AQ9BYI3 521 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ATP6V1HQ9UI12 483 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 SSU72P8A0A1W2PR75 194 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 KRT6AP02538 564 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 KRT6BP04259 564 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CDC25BP30305 580 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CORO1AP31146 461 aaKnown RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 KRT6CP48668 564 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CLEC16AQ2KHT3 1053 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 HSDL1Q3SXM5 330 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 RALGPS1Q5JS13 557 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CEP85LQ5SZL2 805 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 SARM1Q6SZW1 724 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ZNF513Q8N8E2 541 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 DPEP2Q9H4A9 486 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 IL17RBQ9NRM6 502 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 KLHL14Q9P2G3 628 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 FAM107AO95990 144 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 GPR65Q8IYL9 337 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 LSMEM2Q8N112 164 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 TRIML2Q8N7C3 387 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ZNF507Q8TCN5 953 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 MAGEH1Q9H213 219 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ALG13Q9NP73 1137 aaKnown RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 GKN1Q9NS71 199 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 EIF3LQ9Y262 564 aaKnown RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ARIH1Q9Y4X5 557 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 E2F8A0AVK6 867 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ANKDD1BA6NHY2 528 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 SUPT3HB4E1H0 165 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 SGTAO43765 313 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 SLC37A4O43826 429 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 PMPCBO75439 489 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ERCC1P07992 297 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 WARSP23381 471 aaKnown RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CMPK1P30085 196 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CBX2Q14781 532 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 TRIP4Q15650 581 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CBWD3Q5JTY5 395 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CBWD5Q5RIA9 395 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 RBM43Q6ZSC3 357 aaKnown RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ZDHHC5Q9C0B5 715 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 VPS11Q9H270 941 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 FBXO2Q9UK22 296 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-205ENST00000465950 GRIN2DO15399 1336 aa9.64□□□□□ -0.87
SCAF11-205ENST00000465950 ISM1B1AKI9 464 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GJB6O95452 261 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 ESRRAP11474 423 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 BRCC3P46736 316 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GTF2BQ00403 316 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GRIN1Q05586 938 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GSTA3Q16772 222 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 SPDYAQ5MJ70 313 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 CBWD2Q8IUF1 395 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 SIRT2Q8IXJ6 389 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 LRIG1Q96JA1 1093 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 BPIFA3Q9BQP9 254 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 KCNN2Q9H2S1 579 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 LMAN1LQ9HAT1 526 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms